Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 154 4e-32
seq1272 132 1e-25
seq1293 127 6e-24
seq732 91.5 4e-13
seq531 87.8 5e-12
seq897 86.0 2e-11
>seq1144
Length=167757
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || || || || ||||| || ||||| || |
Sbjct 91899 TTTGCATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGT 91840
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | |||||| ||||| ||||| || ||||| || || || || || ||||| |
Sbjct 91839 AATCAGAGAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGT 91780
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||||||||| || |||||||| || || | || || || ||||| | || || |
Sbjct 91779 CCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACG 91720
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || |||| ||||| || || || || || || |||||||||||
Sbjct 91719 ACTCCACCTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||||| ||| ||||| | | || ||||| ||||| || ||||| || ||||| || |
Sbjct 92127 TTTACTGACCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGT 92068
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | ||||| ||||| ||||| || ||||| || || || || || ||||| |
Sbjct 92067 AATCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGT 92008
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||||||||| || |||||||| || || | || || || ||||| | || ||||
Sbjct 92007 CCGGAGGAATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATG 91948
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| |||| |||||||| || | || || ||||| || |||||
Sbjct 91947 ACTCGACCTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
Score = 134 bits (148), Expect = 4e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || ||||||||||| || ||||| || ||
Sbjct 91667 CATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTC 91608
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||| ||||| || || ||||||||||| ||||| ||||| || ||
Sbjct 91607 GGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGG 91548
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || ||||| || |||||||| || | || || || || || | |||||| | ||
Sbjct 91547 GGGGATGCCTTCCTTGTCCTGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTC 91488
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || || || | ||||| || || || || || ||
Sbjct 91487 GACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 91449
Score = 127 bits (140), Expect = 6e-24
Identities = 167/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 140491 TCAAACTAATAT-TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCT 140549
||||||| | | ||| |||||||||||| | | || || || || || ||||||||
Sbjct 91400 TCAAACTTACAGATTTGCATACCACCACGGAGGCGGAGGACTAGGTGGAGGGTAGACTCC 91341
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | ||||| ||||| ||||| || || |||||||||||
Sbjct 91340 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATG 91281
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||| ||||| || || || || ||||| || |||||||| || | || || || ||
Sbjct 91280 AGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCG 91221
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| | ||| || | || || || || || | |||||||| || | |||
Sbjct 91220 ATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCACTGT 91171
>seq1272
Length=124026
Score = 132 bits (146), Expect = 1e-25
Identities = 240/350 (69%), Gaps = 6/350 (2%)
Strand=Plus/Plus
Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186
||||| || |||||| ||| || ||||| | | | |||||||||||| |||
Sbjct 88110 CCATCCTCACCATATAGGAACTGCACAATATCTCCGAGAGAGTTTCTTACAGTTCCGTCA 88169
Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246
|||| | | | |||||||| | || || | ||||| || ||| ||||||||||
Sbjct 88170 TATCGAGCACTCAAATCTTCAAGGGCCTTGACCAGTCGACGCTGAATGTAACCAGTTTCT 88229
Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306
||| || || ||||||||||| | ||| | |||||| |||| || |||||||| ||
Sbjct 88230 GCAGTCTTGACAGCAGTATCAATCAGACCCTCGCGACCAGCCATGGCGTGGAAGAAGAAC 88289
Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366
|| | ||||||||| |||| | | | || |||| | || || | || | || ||
Sbjct 88290 TCTGAAGGAGTAAGACCACGGAGATAAGAGTTCTCGACGAAACCACGAGCTTCGGGGGAG 88349
Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426
| ||||| || ||| |||| || | ||||| | || || || | ||||| || ||
Sbjct 88350 TAATCATCCTTGGTAAAATGGGGCAGCGTACGGTACTTGAAGCCGAAGGGAATACGCTTA 88409
Query 378427 CCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473
|| || ||| |||| |||| |||| |||| ||| || | ||||||
Sbjct 88410 CCCTCCACAATCTGCTGACCGACAAGAGCAG---TCATCTGCGAAATATT 88456
>seq1293
Length=96073
Score = 127 bits (140), Expect = 6e-24
Identities = 269/400 (67%), Gaps = 1/400 (0%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| ||||| || || ||||| | || ||| || | |||||| || || |
Sbjct 73326 CCCGAGGAAATCTCCTCCATGGTCCTCACCAAGATGCGTGAGACTGCTGAGGCCTACCTC 73385
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
||||| || || | ||||||| | || || || ||||| || || || ||| |||
Sbjct 73386 GGTGAGACCGTCAACAATGCTGTCGTCACCGTCCCCGCCTACTTCAACGACAGCCAACGT 73445
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| ||| ||| || || | || || || | || || || |||
Sbjct 73446 CAAGCTACCAAGGATGCCGGCCTCATCGCCGGCCTCAACGTCCTTCGTATCATCAACGAA 73505
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
||||||||||| || || || ||||| || || || | | ||| || || ||
Sbjct 73506 CCCACTGCTGCCGCTATCGCTTATGGCCTCGACAAGAAGGTTGAGGGCGAGCGCAACGTT 73565
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| || || || || || || |||||||| ||||| || || || || | || || ||
Sbjct 73566 CTCATCTTCGACTTGGGCGGCGGTACTTTCGATGTCTCCCTTCTCACTATCGAGGAAGGC 73625
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
|| || || || || | ||||| ||||| || || |||||||| || || || || ||
Sbjct 73626 ATCTTCGAGGTCAAGTCCACTGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGACAAC 73685
Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931
|| | || || ||||| || ||||| || || ||||
Sbjct 73686 CGCTTGGTCAACCACTTTGTGAATGAATTCAAACG-CAAG 73724
>seq732
Length=233276
Score = 91.5 bits (100), Expect = 4e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || || || ||||| ||| || || || || || ||
Sbjct 60342 ACCACCACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 60401
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || ||||||||||| || || ||||| || || ||
Sbjct 60402 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGG 60461
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||| || || || ||||| || || | || || || || || | || || | || ||
Sbjct 60462 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 60521
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || || ||||||||
Sbjct 60522 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 60569
>seq531
Length=591266
Score = 87.8 bits (96), Expect = 5e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 349211 GATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATT 349270
||||| ||||||||||| ||||| | ||| ||| |||| || ||||| ||
Sbjct 453724 GATTTGGGTACTACTTACAGCTGTGTCGGTGTGATGCAGAATGGCAAGGTCGAAATTCTT 453665
Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330
| |||||||| |||||| ||| || || |||||||| || || ||||| ||||||
Sbjct 453664 GTCAATGATCAGGGTAACCGAATTACTCCCTCATACGTCGCCTTCACCGAGGAGGAGCGT 453605
Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390
|| ||||||| || || || || ||||| || | || || | || || | || |||
Sbjct 453604 CTGGTTGGTGACTCCGCCAAGAACCAAGCCGCCTCCAACCCCACCAACACCATCTTCGAT 453545
Query 349391 GCTAAG 349396
| ||||
Sbjct 453544 GTTAAG 453539
>seq897
Length=151945
Score = 86.0 bits (94), Expect = 2e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||| || ||||| || |||||||||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || ||||| || || ||||| || || || ||||| || || | || ||||| ||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | || || | || || ||||| || | ||||| || || || || || || |||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 73522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515228384976020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |