Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq907 311 1e-79
>seq907
Length=75695
Score = 311 bits (344), Expect = 1e-79
Identities = 925/1414 (65%), Gaps = 56/1414 (4%)
Strand=Plus/Plus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566
|||||| || |||| | || || ||| ||||||| ||||| ||||||||| ||
Sbjct 17223 GAACTCACCAGCCAAGACACGACGTGAGTATATGTTGGATGTGTAAGGCTCGAAACATTC 17282
Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626
|||||| |||| ||||| | ||| ||| || |||||||| || | || ||| ||
Sbjct 17283 GTTGTTACCCAAAATCTGAGAGGTACTGGCAGTAGGCATGGGCGCCATGAGCAGACTGTT 17342
Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGC 78680
|| | || ||| ||||| || | ||| | |||||| | || |
Sbjct 17343 ACGGATGCCGTGCTCCTTGACCTGCTCACGGAGGGATTCCCAGTCCCAGAGGTCT---GA 17399
Query 78681 CGCGATCCC---CCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAA 78737
| || | ||||||||| || || |||||||| || | || || ||||||||
Sbjct 17400 TGGTTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGTAGGGGAGCCCTTGAA 17459
Query 78738 CGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTA 78797
|| ||| | ||||||||||||| || | | ||| | |||||| ||||| ||
Sbjct 17460 GGTAGAGTAGGGACCCTCCTCCTTGGACAGCTGGACTGAGGCAGTCAGGGCGGCGTGATA 17519
Query 78798 CACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCC 78857
| || || ||||| ||||| || || || || | || ||||| | | ||
Sbjct 17520 GATAGTTTCAAAGATCTGTTTGTTCAGTTCACGAGCTTCGGGGGACTCGAAAGGCATGCG 17579
Query 78858 GAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCAT 78917
||| | ||| |||| || || |||||||| || | | | || |||||||| |||||
Sbjct 17580 GAGGGCAAGGAATGCATCCGCAAGACCCTGGACACCAACACCAATGGGTCGGTGACGCAT 17639
Query 78918 GTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTT 78977
|||||| || || ||| ||| || || ||| || |||| ||| |||||
Sbjct 17640 GTTGCTGTTACGAGCCTCCTGAACAGGATAGTGGTTGACGTCAATGATCTTGTTAAGGTT 17699
Query 78978 ACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAA---ATGATTTCCTTT 79034
|| ||| | |||| || |||| || ||| ||| ||| | || ||| | |
Sbjct 17700 GCGAACGACAGTCTGAGTGACATCGTGCAGTTTTTGGAAGTCATAGCAATCATTGCTGTA 17759
Query 79035 G---ATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG--- 79088
| | |||| || ||| ||| || || |||||||| ||||| ||| || ||
Sbjct 17760 GTCAACAAAAGAAGGAAGGGCCAGGGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGC 17819
Query 79089 GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT--GATGGTGCCGATGTTC 79146
||| | |||||||| || ||||| | || || ||| ||| || |||| ||||
Sbjct 17820 GCTGTAT---TCGATGATCTCAGTGCAAAGGTTGGA--ACTGCGGATAGTACCGAGGTTC 17874
Query 79147 TTCTGGTTGCTCTTCTCGTTACAGGCGT---CCTTGTAGCACATGTACGGCGTCCCGGTC 79203
|||||||| ||||| ||| ||||| ||||||| |||| | || | || ||
Sbjct 17875 TTCTGGTTACTCTTGCGGTT---GGCGTGATCCTTGTAAAGCATGAAGGGGTTGCCAGTT 17931
Query 79204 TCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTAC 79263
|| |||| || ||||| | ||| ||||| | ||||| | |||||
Sbjct 17932 TCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGGGCCTTCATGG---TCTTG--- 17985
Query 79264 CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCC---------CCATAG 79314
||||| | ||| || | || ||| ||||| || |||||| ||||||
Sbjct 17986 CGACCTT-TGC--CGGCCTTCTCGTAGCTCTCGTAGAGAGCCTCAAACTCATCGCCATAG 18042
Query 79315 ACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCA 79374
|| | || || |||||||||| || ||||| || |||||| ||| ||||||
Sbjct 18043 CAGTCAGCAAGACCAGGGCACTCGTTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCC 18102
Query 79375 ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATC 79434
|| || |||||| | || ||||||||||| || ||| ||||| || ||| | |
Sbjct 18103 ACACGCTTCATGAACAAATCGGGGATCCACAGAGCGAGGAACAGGTCACGAGCACGGACC 18162
Query 79435 TCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGC 79494
||||| | || |||||| || || || ||||| || | | |||||||||||| |||
Sbjct 18163 TCCTCCTTTCCATGGTTCTTGCGAAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGC 18222
Query 79495 TCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCC 79554
|| || ||||||||||| | ||| |||||| ||| ||||| | || || || ||
Sbjct 18223 TCGAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGATCAACATATCGAGCA 18282
Query 79555 GTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTG 79614
||||||||||| || ||||||||||| | |||| || | ||||| || |||
Sbjct 18283 GTGTTGTTGAATACACGGAGCATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCA 18342
Query 79615 ATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACT 79672
|| | || | || || || | | || | || || |||||||| || | | |
Sbjct 18343 ATATAAGAGCCAGTGGCACGGATACGGT-GAAC-GTTGAGACCGATGCCACCAGCCATTT 18400
Query 79673 TGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCA 79732
||||||| || || |||||| || || || || ||||| || ||| |||||||
Sbjct 18401 TGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCA 18460
Query 79733 TAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCG 79792
| ||||||||||||| |||| ||| || | ||||| ||||||||||| || |
Sbjct 18461 TGTCGACCAGGAAGCATGAAGACAGCTGGGGCTGAGGAGTACCAGCGTTGAAGAGTGTGG 18520
Query 79793 GCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGA 79852
| | || || ||||||||||| | ||| || | ||| ||||| ||| ||| |
Sbjct 18521 GAGAAGCATGTGTGAAGAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCAA 18580
Query 79853 GGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
|| ||| || ||| ||||| | ||| |||||
Sbjct 18581 TGTTGTCACCCCAGATACCGACAGAGACACGCAT 18614
Score = 260 bits (288), Expect = 2e-64
Identities = 906/1404 (65%), Gaps = 36/1404 (3%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| ||| | ||||| ||| || ||| || | ||| |||| |||||| ||| ||
Sbjct 18614 ATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACCTACAAC 18555
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
|| ||| | |||||||||||| || || | || || || |||||||| |||||
Sbjct 18554 CTCATGTCCATGAAGTTCTTCACACATGCTTCTCCCACACTCTTCAACGCTGGTACTCCT 18495
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
| || ||| |||| || ||||| || | |||||||| ||||| |||||||| ||
Sbjct 18494 CAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGACAGTATTGAGGGTATT 18435
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
|| || || |||||| || || |||||||| | | || || ||||| || ||
Sbjct 18434 TATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGGTGGCATCGGTCTCAAC 18375
Query 19358 TGCTCGAA-TATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416
| || |||||| | | ||| | || || || ||||| || ||||
Sbjct 18374 -GTTCACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAACGGTACCTCCAACGG 18316
Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476
| | || |||||||| || ||||||||||| || | || || | ||||| |||
Sbjct 18315 TGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCAA 18256
Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536
||| || || | |||||||||||||||||||| |||||||| ||||| | || ||
Sbjct 18255 CAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAATT 18196
Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596
|| || || ||| |||||| || | |||||| | || ||| ||||| ||| ||
Sbjct 18195 TCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTCCGTGCTCGTGACCTGTTCCTCGC 18136
Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656
||||||| || || | |||||| || || |||||| ||| || ||| || ||
Sbjct 18135 TCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAACGGCGACTGGACTCTAAT 18076
Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA 19716
||| || |||| |||||||| || | ||| ||| ||||| | ||| | | | ||
Sbjct 18075 GTGTCCCAACGAGTGCCCTGGTCTTGCTGACTGCTATGGCGATGAGTTTGAGGCTCTCTA 18016
Query 19717 CCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGG--------TCCGGGCCCGGGAC 19768
| || |||| || | |||||| || ||||| | | ||||| |
Sbjct 18015 CGAGAGCTACG-AG---AAGGCCGG--CA--AAGGTCGCAAGACCATGAAGGCCCAAAAG 17964
Query 19769 GTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAG 19828
||||| || | | ||| | ||| ||| || |||| || | |||| ||||||
Sbjct 17963 CTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCCTTCATGCTTTACAAG 17904
Query 19829 GACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACC 19886
|| ||| ||| |||| || ||||||||| |||| | ||| ||| |||||||
Sbjct 17903 GATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGGTACTATCCGCAGT--TCCAACC 17846
Query 19887 TGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGT 19946
| || ||||| ||||| || | || || ||| ||||| || || || || |
Sbjct 17845 TTTGCACTGAGATCATCGAATACAGCGCTCCTGATGAGGTCGCCGTCTGCAACCTCGCTT 17786
Query 19947 CCCTGTGCCTGCCGACTTTCGTCAAGGCCTCC------TCCTTCGACTTTGCCAAATTGT 20000
||||| ||| || |||| || | | | | || ||||| ||| ||
Sbjct 17785 CCCTGGCCCTTCCTTCTTTTGTTGACTACAGCAATGATTGCTATGACTTCCAAAAACTGC 17726
Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060
|||| || || | | ||| || || || || |||| || ||| || |
Sbjct 17725 ACGATGTCACTCAGACTGTCGTTCGCAACCTTAACAAGATCATTGACGTCAACCACTATC 17666
Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120
| ||| ||| || || || ||||| ||||| || || | | || |||||||
Sbjct 17665 CTGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTGTTGGTGTCCAGG 17606
Query 20121 GCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180
| || || || | ||| | ||| || | | ||||| ||| | || || || |
Sbjct 17605 GTCTTGCGGATGCATTCCTTGCCCTCCGCATGCCTTTCGAGTCCCCCGAAGCTCGTGAAC 17546
Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCG 20240
| ||||| ||||| || | | || ||||| ||||| | || | | ||
Sbjct 17545 TGAACAAACAGATCTTTGAAACTATCTATCACGCCGCCCTGACTGCCTCAGTCCAGCTGT 17486
Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300
|||| ||||| || || ||| || |||||||| || || | || |||||||| ||||
Sbjct 17485 CCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGCTCCCCTACCTCTGAGGGTATTCTCC 17426
Query 20301 AGCCGGACATGTGGGGCGT----CACTGAGA---ATGAGTTTTGGAGCGCCCTCAAGGTT 20353
|| ||||||||| || | | ||| || | | ||| ||||| |
Sbjct 17425 AGTTCGACATGTGGAATGTGAAACCATCAGACCTCTGGGACTGGGA-ATCCCTCCGTGAG 17367
Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413
|| ||||| ||||| | || ||| ||||| | ||||||||||| || |||
Sbjct 17366 CAGGTCAAGGAGCACGGCATCCGTAACAGTCTGCTCATGGCGCCCATGCCTACTGCCAGT 17307
Query 20414 ACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTG 20473
||| | ||||| |||| |||||||| ||||||||| ||||| ||||||| ||||
Sbjct 17306 ACCTCTCAGATTTTGGGTAACAACGAATGTTTCGAGCCTTACACATCCAACATATACTCA 17247
Query 20474 CGTCGTACACTGGCCGGTGAGTTC 20497
|||||| |||| |||||||||
Sbjct 17246 CGTCGTGTCTTGGCTGGTGAGTTC 17223
Score = 102 bits (112), Expect = 9e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| || | |||||||||||| ||||||||||| ||||| || | |||||| |||
Sbjct 16903 GTACGGAGATAGTACATGCCGGTCTTGAGACCGAGTTTCCAGCCAGTGAAGTGCATGCTC 16962
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| | |||| ||| | |||| || |||| |||||| || || ||||||||||| |||
Sbjct 16963 GTTATCTTGCCCATGGTTGGGTCCTTCATGTGGATGTTCAGAGATTGGGACTGGTCAATG 17022
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGAC-CGACTTTTGCGGAATCTCCCAGATGGT 78368
| || || |||||||| ||||| | || || ||| || | |||||||||| |||
Sbjct 17023 AAAGCGCCTCGGTCGGCAGCCATCTGGACCACTTGAC-GCTGGGAGATCTCCCAGACGGT 17081
Query 78369 CCGGTAAATGGCCTT 78383
| ||| | |||||
Sbjct 17082 CTTGTAGAGAGCCTT 17096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548515612209600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |