Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq907 221 1e-52
seq712 96.9 4e-15
>seq907
Length=75695
Score = 221 bits (244), Expect = 1e-52
Identities = 510/757 (67%), Gaps = 16/757 (2%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| ||| | | |||||| |||||| || |||||||| ||||| ||| ||
Sbjct 18614 ATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACCTACAAC 18555
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
| ||| | |||| ||| || || || | || || || |||||||||||||| |
Sbjct 18554 CTCATGTCCATGAAGTTCTTCACACATGCTTCTCCCACACTCTTCAACGCTGGTACTCCT 18495
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| || ||| |||| ||||||||||| | |||||||| ||| || || || ||
Sbjct 18494 CAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGACAGTATTGAGGGTATT 18435
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
|| || || |||||| |||||| |||||||| | | ||||| |||||| || ||
Sbjct 18434 TATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGGTGGCATCGGTCTCAAC 18375
Query 53435 TGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| || | ||| |||||| | ||| | || || || ||||| | || | |
Sbjct 18374 -GTTC-ACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAACGGTACCTCCAACG 18317
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| | || |||||||| || ||||||||||| || || || || | ||||||||
Sbjct 18316 GTGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCA 18257
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | |||||||||||||||||||| |||||||||||| | | || |
Sbjct 18256 ACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAAT 18197
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671
|||| || || || ||| || || | || ||| | || ||| |||||||||||
Sbjct 18196 TTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTCCG-TGCTCGTGACCTGTTCCTC 18138
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
||||||||||| || || | |||||| | ||||||||| ||| || ||| ||
Sbjct 18137 GCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAACGGCGACTGGACTCTA 18078
Query 53732 ATGTGCCCGAACGAGTGCCCCGG-CCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
||||| || ||||||||||| || | | | | || ||| || || |||||| | | |
Sbjct 18077 ATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTG-CTATGGCGATGAGTTTGAGGCTCT 18019
Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTCAAGGCGCGTGAGG 53846
|| || |||| || | ||||| | | | |||| | ||||| | ||
Sbjct 18018 CTACGAGAGCTACG-AG---AAGGCCGGCAAAGGTCGCAAGACCATGAAGGCCCAAAAGC 17963
Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906
| ||| | || || ||| || ||| || || || | || | |||| |||||||
Sbjct 17962 TCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCCTTCATGCTTTACAAGG 17903
Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| | |||| ||||| |||||||||||| ||||
Sbjct 17902 ATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGG 17866
>seq712
Length=126004
Score = 96.9 bits (106), Expect = 4e-15
Identities = 212/313 (68%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 117291 ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGAC 117350
|||| | ||||| |||||||| ||||| | || ||||| || ||||| || |
Sbjct 104664 ACGGCGAGAGGCGGGTGAAAATATAACGGGGACTGGCAGCGTCAGAACCACCGCTGAGTC 104605
Query 117351 GCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTT 117410
| | |||||| | |||||| ||||| | ||| | |||||| | || | | ||||
Sbjct 104604 GAGAACCGAAGTTTCCACTTGGCTCTAGACAGTTGATGTTGTTCGACCCAATGTAATTTT 104545
Query 117411 GAGCCAAGTTGACAATCGTACCTTGGAG-GCTCGCCTCACCATGGTGATACGCCGTCTGC 117469
|||| | || || || ||||| | | | ||||||||||| || || || |
Sbjct 104544 GAGCTAGACCGATGATTGTCTGCTGGAGAGATTGT-TCACCATGGTGGTATGCTGTGTTT 104486
Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGA 117527
|| | || || || |||| | | |||||||| |||| |||| | ||| ||||||
Sbjct 104485 TCAGAAACATAACCAGCCAATTCAACCACCTTCTTGTCCTTGACTAAA--TTCCTCTTGA 104428
Query 117528 GGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCG 117587
|||||| || || ||||||||||||| ||||| | ||||| ||| ||| || |
Sbjct 104427 AGCAGGCGTAGATGACCTTGCGCTGACCAGGCTTGAAGCCATCGATGACGGAAGGAATAG 104368
Query 117588 AACGCTTGATGTC 117600
||||| | ||||
Sbjct 104367 AACGCATATTGTC 104355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547206834132000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |