Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq907 221 1e-52 seq712 96.9 4e-15 >seq907 Length=75695 Score = 221 bits (244), Expect = 1e-52 Identities = 510/757 (67%), Gaps = 16/757 (2%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| ||| | | |||||| |||||| || |||||||| ||||| ||| || Sbjct 18614 ATGCGTGTCTCTGTCGGTATCTGGGGTGACAACATTGAGCGTGTCCTCGAGACCTACAAC 18555 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | |||| ||| || || || | || || || |||||||||||||| | Sbjct 18554 CTCATGTCCATGAAGTTCTTCACACATGCTTCTCCCACACTCTTCAACGCTGGTACTCCT 18495 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || || ||| |||| ||||||||||| | |||||||| ||| || || || || Sbjct 18494 CAGCCCCAGCTGTCTTCATGCTTCCTGGTCGACATGAAGGAGGACAGTATTGAGGGTATT 18435 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || || |||||| |||||| |||||||| | | ||||| |||||| || || Sbjct 18434 TATGACACCCTCAAGACCTGTGCCATGATCTCCAAAATGGCTGGTGGCATCGGTCTCAAC 18375 Query 53435 TGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 | || | ||| |||||| | ||| | || || || ||||| | || | | Sbjct 18374 -GTTC-ACCGTATCCGTGCCACTGGCTCTTATATTGCCGGTACCAACGGTACCTCCAACG 18317 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | | || |||||||| || ||||||||||| || || || || | |||||||| Sbjct 18316 GTGTGACACCCATGCTCCGTGTATTCAACAACACTGCTCGATATGTTGATCAGGGTGGCA 18257 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||||| || | |||||||||||||||||||| |||||||||||| | | || | Sbjct 18256 ACAAGCGACCCGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTATTCGAAT 18197 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671 |||| || || || ||| || || | || ||| | || ||| ||||||||||| Sbjct 18196 TTCTGGATCTTCGCAAGAACCATGGAAAGGAGGAGGTCCG-TGCTCGTGACCTGTTCCTC 18138 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 ||||||||||| || || | |||||| | ||||||||| ||| || ||| || Sbjct 18137 GCTCTGTGGATCCCCGATTTGTTCATGAAGCGTGTGGAGAAGAACGGCGACTGGACTCTA 18078 Query 53732 ATGTGCCCGAACGAGTGCCCCGG-CCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 ||||| || ||||||||||| || | | | | || ||| || || |||||| | | | Sbjct 18077 ATGTGTCCCAACGAGTGCCCTGGTCTTGCTGACTG-CTATGGCGATGAGTTTGAGGCTCT 18019 Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTCAAGGCGCGTGAGG 53846 || || |||| || | ||||| | | | |||| | ||||| | || Sbjct 18018 CTACGAGAGCTACG-AG---AAGGCCGGCAAAGGTCGCAAGACCATGAAGGCCCAAAAGC 17963 Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906 | ||| | || || ||| || ||| || || || | || | |||| ||||||| Sbjct 17962 TCTGGTACGCCATTCTCGAGGCTCAGACCGAAACTGGCAACCCCTTCATGCTTTACAAGG 17903 Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 || | |||| ||||| |||||||||||| |||| Sbjct 17902 ATCACGCCAACCGCAAGAGTAACCAGAAGAACCTCGG 17866 >seq712 Length=126004 Score = 96.9 bits (106), Expect = 4e-15 Identities = 212/313 (68%), Gaps = 6/313 (2%) Strand=Plus/Minus Query 117291 ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGAC 117350 |||| | ||||| |||||||| ||||| | || ||||| || ||||| || | Sbjct 104664 ACGGCGAGAGGCGGGTGAAAATATAACGGGGACTGGCAGCGTCAGAACCACCGCTGAGTC 104605 Query 117351 GCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTT 117410 | | |||||| | |||||| ||||| | ||| | |||||| | || | | |||| Sbjct 104604 GAGAACCGAAGTTTCCACTTGGCTCTAGACAGTTGATGTTGTTCGACCCAATGTAATTTT 104545 Query 117411 GAGCCAAGTTGACAATCGTACCTTGGAG-GCTCGCCTCACCATGGTGATACGCCGTCTGC 117469 |||| | || || || ||||| | | | ||||||||||| || || || | Sbjct 104544 GAGCTAGACCGATGATTGTCTGCTGGAGAGATTGT-TCACCATGGTGGTATGCTGTGTTT 104486 Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGA 117527 || | || || || |||| | | |||||||| |||| |||| | ||| |||||| Sbjct 104485 TCAGAAACATAACCAGCCAATTCAACCACCTTCTTGTCCTTGACTAAA--TTCCTCTTGA 104428 Query 117528 GGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCG 117587 |||||| || || ||||||||||||| ||||| | ||||| ||| ||| || | Sbjct 104427 AGCAGGCGTAGATGACCTTGCGCTGACCAGGCTTGAAGCCATCGATGACGGAAGGAATAG 104368 Query 117588 AACGCTTGATGTC 117600 ||||| | |||| Sbjct 104367 AACGCATATTGTC 104355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547206834132000