Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq907 235 6e-57 seq732 170 2e-37 seq1144 167 3e-36 seq897 141 1e-28 seq712 96.9 4e-15 >seq907 Length=75695 Score = 235 bits (260), Expect = 6e-57 Identities = 805/1232 (65%), Gaps = 37/1232 (3%) Strand=Plus/Plus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 |||||||||| ||| | || ||||| || | || || ||| ||| || ||| || Sbjct 17412 CCACATGTCGAACTGGAGAATACCCTCAGAGGTAGGGGAGCCCTTGAAGGTAGAGTAGGG 17471 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 |||||| ||||| ||||| || | | ||||| |||||||| || ||||| Sbjct 17472 ACCCTCCTCCTTGGACAGCTGGACTGAGGCAGTCAGGGCGGCGTGATAGATAGTTTCAAA 17531 Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720 || ||||||| | || || | ||| ||||| | || || | | ||| Sbjct 17532 GATCTGTTTGTTCAGTTCACGAGCTTCGGGGGACTCGAAAGGCATGCGGAGGGCAAGGAA 17591 Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC 80780 | || || || ||||| || || | | || || ||||| ||| |||| | | | Sbjct 17592 TGCATCCGCAAGACCCTGGACACCAACACCAATGGGTCGGTGACGCATGTT-GCTGTTAC 17650 Query 80781 G-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAA 80839 | |||||| ||| || || ||| || |||| ||| |||||||| ||| Sbjct 17651 GAGCCTCCTGAACAGGATAGTGGTTGACGTCAATGATCTTGTTAAGGTTGCGAACGACAG 17710 Query 80840 CCCGTGTAACATCATGAAGTTTCTGAAAGTC---GAATTGGTTCCCCT--TCA-CAAATG 80893 | | || ||||| || ||||| || ||||| | | | || | | ||| |||| | Sbjct 17711 TCTGAGTGACATCGTGCAGTTTTTGGAAGTCATAGCAATCATTGCTGTAGTCAACAAAAG 17770 Query 80894 CCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGA 80953 |||||| |||||| || || ||||| ||||| ||||| |||| | | | | |||| Sbjct 17771 AAGGAAGGGCCAGGGAAGCGAGGTTGCAGACGGCGACCTCATCAGGAGCGCTGTATTCGA 17830 Query 80954 CGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGG 81013 ||| || ||||| | || ||| || ||||| ||||| |||||||| |||| Sbjct 17831 TGATCTCAGTGCAAAGGTTGGAACTGCGGATAGTACCGAGGTTCTTCTGGTTACTCTTGC 17890 Query 81014 CGTTGCAAGCGT---CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 |||| |||| ||||||| |||| | ||| | || || ||| ||| | || || Sbjct 17891 GGTTG---GCGTGATCCTTGTAAAGCATGAAGGGGTTGCCAGTTTCGGTCTGAGCCTCGA 17947 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | ||||||| ||| | || | ||||| | |||||| |||||| | | | | Sbjct 17948 GAATGGCGTACCAGAGCTTTTGGGCCTTCATGGTCTTGCGACCTTTGCCGGCCTTCTCGT 18007 Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCG 81189 | | |||| | || |||| | || | | ||| ||| || | ||||||||| Sbjct 18008 AGCTCTCGTAGAGAGCCTCAAACTCATCGCCATAGCAGT-CAGCAAGACCAGGGCACTCG 18066 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 || || ||||| || ||||||| || ||||| ||| ||||||||| || ||| Sbjct 18067 TTGGGACACATTAGAGTCCAGTCGCCGTTCTTCTCCACACGCTTCATGAACAAATCGGGG 18126 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||| || ||| ||||||||| || ||| || ||||||| | || ||||| ||| Sbjct 18127 ATCCACAGAGCGAGGAACAGGTCACGAGCA-CGGACCTCCTCCTTTCCATGGTTCTTGCG 18185 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC- 81366 | || ||||| || | | ||| || ||||| ||||| || || | ||||| | || Sbjct 18186 AAGATCCAGAAATTCGAATACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACC 18245 Query 81367 ----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAA 81422 | |||| ||||||||| | || || || ||||| ||| |||||||| | Sbjct 18246 GGGTCGCTTG---TTGCCACCCTGATCAACATATCGAGCAGTGTTGTTGAATACACGGAG 18302 Query 81423 CATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 ||| || | | ||| | || |||||| ||||| | ||| || || |||| || Sbjct 18303 CATGGGTGTCACACCGTTGGAGGTACCGTTGGTACCGGCAATATAAGAGCCAGTGGCACG 18362 Query 81483 --CACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-GAAATCTGAGCACACCG 81539 || || ||| |||||||||||||| | ||| ||| || ||| ||||| Sbjct 18363 GATACGGTGAACGTTG--AGACCGATGCCACCAG-CCATTTTGGAGATCATGGCACAGGT 18419 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 || | ||| |||||||| ||||| || || || | |||||||| | || ||| || Sbjct 18420 CTTGAGGGTGTCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACCAGGAAGCATGA 18479 Query 81600 TGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 |||| ||| |||| | ||| || || ||||| ||||| || | || || |||| Sbjct 18480 AGACAGCTG-GGGC-TGAGGAGTACCAGCGTTGAAGAGTGTGGGAGAAGCATGTGTGAAG 18537 Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATA 81717 | | ||||| |||| ||||| || ||| || ||| | |||||| ||| Sbjct 18538 AACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATA 18597 Query 81718 CCGATAGCTACACGCATAAACATGTACTGGGG 81749 |||| || |||||||||| ||||| ||| || Sbjct 18598 CCGACAGAGACACGCATAATCATGTGCTGCGG 18629 >seq732 Length=233276 Score = 170 bits (188), Expect = 2e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 60569 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 60510 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| ||||| || |||||| Sbjct 60509 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 60450 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || |||||||||||||| |||||||||| || ||||| ||| ||||| || Sbjct 60449 CAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 60391 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| || || ||| | || ||||| ||||| Sbjct 60390 CATCCAGAAGGAGAGCACTCTCCACCTGGTCCTCCGCCTTCGTGGTGG 60343 >seq1144 Length=167757 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || || ||||| ||||| |||||||| |||||| Sbjct 91893 ATGCAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCC 91952 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || ||||| ||||||||||||||||| |||||| Sbjct 91953 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 92012 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || ||||||| || ||||| | || || || Sbjct 92013 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAAC 92072 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| ||||| ||||| || ||| | ||||| || || || || Sbjct 92073 ATTCAGAAGGAGTCCACCCTTCACCTTGTCCTCCGTCTCCGTGGCGGTCA 92122 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || || |||||||| || ||||| ||||| ||||| ||||| ||| | Sbjct 91449 GTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCTGATACCATCGAC 91508 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || |||||||||||||| || || || || |||||||||||||| || Sbjct 91509 AACGTTAAGTCAAAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATC 91568 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 |||||||| ||||| || ||||||| || ||||| | ||||| ||| |||| || || Sbjct 91569 TTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTTCCGACTACAATATCCAGAAAGAG 91628 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || || ||| | || || || ||||| Sbjct 91629 TCTACCCTCCACCTGGTCCTCCGCCTCCGTGGTGG 91663 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||||||||| || ||||| ||||| Sbjct 91665 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCC 91724 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || ||||| ||||||||||||||||| |||||| Sbjct 91725 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 91784 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || ||||||| || || || | || || || Sbjct 91785 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAAC 91844 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || || || ||| | || || || ||||| Sbjct 91845 ATTCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTCCGTGGTGG 91891 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || |||||||| || || ||||| ||||| |||| ||| | || | ||| | Sbjct 91177 ACGGGAAAGACTATCACCCTCGAGGTCGAGTCCTCCGATACCATCGACAACGTCAAGTCA 91236 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| || || || || |||||||||||||| || |||||||| ||| Sbjct 91237 AAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAG 91296 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || ||||| | ||||| || |||| ||||| || || || || Sbjct 91297 CAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTCCAC 91356 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 |||||| | || || || ||||| Sbjct 91357 CTAGTCCTCCGCCTCCGTGGTGG 91379 >seq897 Length=151945 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 73523 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 73582 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| || Sbjct 73583 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTG 73642 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || |||||||| |||||||||||||||| || ||||| | ||||| || |||| ||| Sbjct 73643 ATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 73702 Query 27595 G 27595 | Sbjct 73703 G 73703 >seq712 Length=126004 Score = 96.9 bits (106), Expect = 4e-15 Identities = 201/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GTC 32042 || ||| |||||||| ||||||||||| || ||||||||| |||||| ||| | ||| Sbjct 104385 GATGGCTTCAAGCCTGGTCAGCGCAAGGTCATCTACGCCTGCTTCAAGAGGAATTTAGTC 104444 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 || |||| |||||||| | || | || || || | || | || || || ||||| Sbjct 104445 AAG-GACAAGAAGGTGGTTGAATTGGCTGGTTATGTTTCTGAAAACACAGCATACCACCA 104503 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 || || || |||||| || || || || ||||| || | | || | || Sbjct 104504 TGGTGAACAATCTCTCCAGCAGACAATCATCGGTCTAGCTCAAAATTACATTGGGTCGAA 104563 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | |||| || |||||| |||| | || || | || ||| |||||| || Sbjct 104564 CAACATCAACTGTCTAGAGCCAAGTGGAAACTTCGGTTCTCGACTCAGCGGTGGTTCTGA 104623 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTT 32279 ||||| || ||||||| || |||||||| ||| | || | | || ||||| || Sbjct 104624 CGCTGCCAGTCCCCGTTATATTTTCACCCGCCTCTCGCCGTTTGCACGAAAGATCTT 104680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300847300800