Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1144 104 2e-17 >seq1144 Length=167757 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| ||||||| || || ||||| ||||| Sbjct 91665 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCC 91724 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || || || || || || || || || || Sbjct 91725 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 91784 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || || | || | || ||||||||| Sbjct 91785 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAAC 91844 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | || |||| | || | || ||||| || Sbjct 91845 ATTCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTCCGTGGTGGTAT 91894 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| |||| || ||| | ||||| ||||| || || | ||| Sbjct 91893 ATGCAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCC 91952 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || || || || || || || || || || Sbjct 91953 GACACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAG 92012 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || || | ||| | || ||||||||| Sbjct 92013 CAGCGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAAC 92072 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| |||||||| ||| Sbjct 92073 ATTCAGAAGGAGTCCACC 92090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434911115116800