Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq881 89.7 5e-13
>seq881
Length=186784
Score = 89.7 bits (98), Expect = 5e-13
Identities = 204/302 (68%), Gaps = 4/302 (1%)
Strand=Plus/Plus
Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783
|| ||| ||||| || || ||||||| |||||||| ||||| ||||||||
Sbjct 108194 CGAGACATAGAACTGAGCGAACATGTGGCAGGGGGGGAGGACCATCTTGGGGAGATCGGC 108253
Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843
|| ||||| || || | | | | ||||| |||||| | ||| | ||
Sbjct 108254 TGGATTCCAGGCAGTCAATATAAGACGGCGGTCATGAGGGTTT-GTGCGAAGCTTGTGAA 108312
Query 6844 CACGTACTGCA-GCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATAC 6901
| || | ||| ||||||| ||||||| |||| || |||| ||| | || |||
Sbjct 108313 TAAGTTCAGCAAGCTGGTCGACTCCCTGGCCCGTGTAATCCGTCTTGTAGTCGACG-TAC 108371
Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961
|| || |||||||| | ||||||||| ||||| || ||||| | |||||||||||| ||
Sbjct 108372 TCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGG 108431
Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACC 7021
|| || ||| | || || || || || || || || | | ||||| ||||| | |
Sbjct 108432 TGTGTCAAGCCCAGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATC 108491
Query 7022 CC 7023
||
Sbjct 108492 CC 108493
Score = 89.7 bits (98), Expect = 5e-13
Identities = 204/302 (68%), Gaps = 4/302 (1%)
Strand=Plus/Minus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
||| | ||||| ||||| | | || || || || || || || || | ||| || ||
Sbjct 108493 GGGATCAAGATTTGGGATGGAAATGGATCCCGCGAATTCCTCGATAACCTGGGCTTGACA 108434
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
|| |||||||||||| | ||||| || ||||| ||||||||| | |||||||| ||
Sbjct 108433 CACCGTGAGGAGGGCGACCTCGGCCCTGTTTACGGCTTCCAGTGGCGGCACTTTGGCGCA 108374
Query 34442 GAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTACG 34499
||||| || | ||| |||| || |||| ||||||| ||||||| ||| | ||
Sbjct 108373 GAGTA-CGTCGACTACAAGACGGATTACACGGGCCAGGGAGTCGACCAGCTTGCTGAACT 108315
Query 34500 TGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACC 34559
| || | ||| | |||||| ||||| | | | | || || ||||| |
Sbjct 108314 TATTCACAAGCTTCGCAC-AAACCCTCATGACCGCCGTCTTATATTGACTGCCTGGAATC 108256
Query 34560 CGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCG 34619
| |||||||| ||||| |||||||| ||||||| || || ||||| |||
Sbjct 108255 CAGCCGATCTCCCCAAGATGGTCCTCCCCCCCTGCCACATGTTCGCTCAGTTCTATGTCT 108196
Query 34620 CG 34621
||
Sbjct 108195 CG 108194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448254891604800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |