Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq732 172 1e-37
seq1144 167 5e-36
seq897 138 3e-27
>seq732
Length=233276
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| |||||| ||| || |||||||| || || |||||
Sbjct 60348 ACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 60407
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || || |||||||| || || ||||| || |||| ||
Sbjct 60408 GCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCC 60467
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||||||||| || || ||||| ||
Sbjct 60468 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 60527
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||||||||| |||||||| ||||| || || | |||||| ||
Sbjct 60528 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572
>seq1144
Length=167757
Score = 167 bits (184), Expect = 5e-36
Identities = 157/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || |||||||| ||||| || || || | |||||| | |||||
Sbjct 91648 AGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCC 91589
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || || || ||||| || || | ||||||||||||
Sbjct 91588 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91529
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| || ||||| |||||||| ||||| || |||||||||||||| |||
Sbjct 91528 TGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTC 91469
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || ||||| ||||| ||
Sbjct 91468 TTGCCAGTGAGGGTCTTGAC 91449
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| |||||||| || || ||||| ||||| | ||||| | |||||
Sbjct 92104 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCC 92045
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| || || || || ||||| ||||||| ||| ||||| |||
Sbjct 92044 TCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC 91985
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| || || ||||| || || ||||||
Sbjct 91984 TGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTC 91925
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | |||||| ||||| | |||||
Sbjct 91924 TTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || |||||||| || || ||||| ||||| | || || | |||||
Sbjct 91876 AGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCGGCCATCC 91817
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| || || || || ||||| ||||||| ||| ||||| |||
Sbjct 91816 TCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC 91757
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| || || |||||||| || || |||
Sbjct 91756 TGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGGGTAATAGTC 91697
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | ||||||
Sbjct 91696 TTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665
Score = 154 bits (170), Expect = 3e-32
Identities = 147/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || | ||||| | |||||
Sbjct 91364 AGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 91305
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || || || ||||| || || | ||||||||||||
Sbjct 91304 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91245
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| || ||||| |||||||| || ||| || |||||||| ||||| |||
Sbjct 91244 TGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTC 91185
Query 211083 TTTCCCGT 211090
||||||||
Sbjct 91184 TTTCCCGT 91177
>seq897
Length=151945
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | ||||| || || |||||||| || |||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || || || |||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 73523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159132098809100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |