Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq732 98.7 9e-16
seq1144 89.7 4e-13
>seq732
Length=233276
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || |||||||| || || || || || ||| || || || | || ||
Sbjct 60361 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 60420
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || ||||| ||||| ||||||||||| | ||| | || ||| |||||| |
Sbjct 60421 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 60480
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | || ||| |||||||| || | ||||| | ||
Sbjct 60481 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 60539
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
||||| || || || || ||||| ||||||||
Sbjct 60540 CCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572
>seq1144
Length=167757
Score = 89.7 bits (98), Expect = 4e-13
Identities = 126/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || || |||| || ||||| | || |||||||| ||||| |||||
Sbjct 91344 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91285
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCG 39211
|| |||||||||||||| | ||| | || || |||||| ||| | | || |||| ||
Sbjct 91284 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC-TGAATCTTTGACTTGA-CG 91227
Query 39212 TCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCA 39262
| | | | |||||| ||||| || || | |||||| | ||||||||||
Sbjct 91226 TTGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTCTTTCCCGTCA 91175
Score = 86.0 bits (94), Expect = 5e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || ||||| || |||| ||| ||||| | || |||||||| ||||| |||||
Sbjct 91628 CTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 91569
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192
|| |||||||||||||| | ||| | || || ||||||
Sbjct 91568 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429538584983420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |