Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq732 149 1e-30
seq1144 132 1e-25
seq897 116 9e-21
>seq732
Length=233276
Score = 149 bits (164), Expect = 1e-30
Identities = 168/225 (75%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| |||||||||||| || || |||| ||||| ||| || ||
Sbjct 60348 ACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 60407
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||||||||| || ||||| || ||||| ||
Sbjct 60408 GCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCC 60467
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| || | ||||| || |
Sbjct 60468 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 60527
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||||||||| ||||| | || || | ||| | ||||| ||
Sbjct 60528 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572
>seq1144
Length=167757
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| || || ||||| |||| |||||| |||| | |||| |||||
Sbjct 91648 AGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCC 91589
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || || || |||||||||||
Sbjct 91588 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91529
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| ||| || |||||||| || || | || || || | ||||| |||
Sbjct 91528 TGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTC 91469
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 91468 TTGCCAGT 91461
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| || || || || |||| ||||| |||| | |||| |||||
Sbjct 91364 AGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 91305
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || || || |||||||||||
Sbjct 91304 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91245
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| ||| || |||||||| || |||| || || || | ||||| |||
Sbjct 91244 TGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTC 91185
Query 225682 TTGCCCGTCA 225691
|| |||||||
Sbjct 91184 TTTCCCGTCA 91175
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||| || || || | |||||||| | | |||| |||||
Sbjct 92104 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCC 92045
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || ||||| || ||||| || ||||| || ||||| ||
Sbjct 92044 TCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC 91985
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || || ||||| || | || || || | || ||||||
Sbjct 91984 TGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTC 91925
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | || | ||||||
Sbjct 91924 TTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
>seq897
Length=151945
Score = 116 bits (128), Expect = 9e-21
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | || | ||||| || || ||||| ||||| |||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || |||||||| |||||||| |||||||| ||| ||| |||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 73538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192510725729960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |