Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq732 149 1e-30 seq1144 132 1e-25 seq897 116 9e-21 >seq732 Length=233276 Score = 149 bits (164), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||||||| || || |||| ||||| ||| || || Sbjct 60348 ACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 60407 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||| ||||||||||| || ||||| || ||||| || Sbjct 60408 GCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCC 60467 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 60468 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 60527 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| ||||| | || || | ||| | ||||| || Sbjct 60528 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572 >seq1144 Length=167757 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || ||||| |||| |||||| |||| | |||| ||||| Sbjct 91648 AGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCC 91589 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 91588 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91529 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || |||||||| || || | || || || | ||||| ||| Sbjct 91528 TGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTGATGGTC 91469 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 91468 TTGCCAGT 91461 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| | |||| ||||| Sbjct 91364 AGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 91305 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 91304 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 91245 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || |||||||| || |||| || || || | ||||| ||| Sbjct 91244 TGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATAGTC 91185 Query 225682 TTGCCCGTCA 225691 || ||||||| Sbjct 91184 TTTCCCGTCA 91175 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || || | |||||||| | | |||| ||||| Sbjct 92104 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCGGCCATCC 92045 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || ||||| || ||||| || ||||| || ||||| || Sbjct 92044 TCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTATCC 91985 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || ||||| || | || || || | || |||||| Sbjct 91984 TGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGGGTAATCGTC 91925 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || | |||||| Sbjct 91924 TTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 >seq897 Length=151945 Score = 116 bits (128), Expect = 9e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | ||||| || || ||||| ||||| ||||| Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || |||||||| |||||||| |||||||| ||| ||| ||| Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| |||| || || || | ||||| ||||||||||| Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 73538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192510725729960