Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq881 87.8 1e-12
>seq881
Length=186784
Score = 87.8 bits (96), Expect = 1e-12
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||||||||| ||||| || || || ||||| ||||| || | ||| |||
Sbjct 108381 AAGTGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAAG 108440
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| || || | || || | ||| || || | ||||| ||||| | ||| ||||
Sbjct 108441 CCCAGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTCG 108500
Query 30137 --GAGAGCTCTTTGGAGTT-TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193
|||||| ||| | || | ||| | ||||| || |||||| || || ||| | | ||||
Sbjct 108501 CTGAGAGC-CTTGGAAGATGTGTTG-CCCTC-GATGAACCAGAGTAGTTCCGCAATGACG 108557
Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
|| | ||| || | ||| || |||||||||||
Sbjct 108558 GCTCTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406156566847240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |