Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq881 87.8 1e-12 >seq881 Length=186784 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| ||||| || || || ||||| ||||| || | ||| ||| Sbjct 108381 AAGTGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAAG 108440 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| || || | || || | ||| || || | ||||| ||||| | ||| |||| Sbjct 108441 CCCAGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTCG 108500 Query 30137 --GAGAGCTCTTTGGAGTT-TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 |||||| ||| | || | ||| | ||||| || |||||| || || ||| | | |||| Sbjct 108501 CTGAGAGC-CTTGGAAGATGTGTTG-CCCTC-GATGAACCAGAGTAGTTCCGCAATGACG 108557 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 || | ||| || | ||| || ||||||||||| Sbjct 108558 GCTCTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406156566847240