Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq881 96.9 3e-15
>seq881
Length=186784
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 27557
||||||||| || || |||| ||| ||||| ||||| || || || ||||| ||||| ||
Sbjct 108368 GTACTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTC 108427
Query 27558 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617
| ||| |||||| || || | || || | ||| || || | ||||| |||||
Sbjct 108428 ACGGTGTGTCAAGCCCAGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTT 108487
Query 27618 TACCCCCTTCTCG--GAGAGCTCTTTGGAGTT-TGTGGACCCTCTGACGAACCACAGCAG 27674
| ||| |||| |||||| ||| | || | ||| | ||||| || |||||| || ||
Sbjct 108488 GATCCCAGCCTCGCTGAGAGC-CTTGGAAGATGTGTTG-CCCTC-GATGAACCAGAGTAG 108544
Query 27675 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
||| | | |||||| | ||| || | ||| || |||||||||||
Sbjct 108545 TTCCGCAATGACGGCTCTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369501165485540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |