Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1144 120 7e-22 seq732 111 4e-19 seq897 93.3 1e-13 >seq1144 Length=167757 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || ||||||||||| ||||| ||||| |||| | |||| Sbjct 91655 GAGGCGGAGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCG 91596 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | ||||||||||| | ||| ||||| Sbjct 91595 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTC 91536 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| ||| || || | || | | | || ||| ||| || || ||||| Sbjct 91535 CTTGTCCTGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGT 91476 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || ||||| ||||| ||||| |||| Sbjct 91475 GATGGTCTTGCCAGTGAGGGTCTTGACGA 91447 Score = 118 bits (130), Expect = 2e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || || ||||||||||| | | |||| Sbjct 91883 GAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCG 91824 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| |||||||| || || | ||||||||||| | ||||| Sbjct 91823 GCCATCCTCAAGCTGCTTT--CCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCC 91766 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || || || | || | |||| || ||| || || || Sbjct 91765 TCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGG 91706 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||| ||||||||||| ||||| | |||||| Sbjct 91705 GTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| || ||||| || || ||||||||||| | | |||| Sbjct 92111 GAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCG 92052 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| |||||||| || || | ||||||||||| | ||||| Sbjct 92051 GCCATCCTCAAGCTGCTTT--CCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCC 91994 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || || || | || | |||| || ||| || ||||| Sbjct 91993 TCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGG 91934 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || | ||||||||| |||| ||||| Sbjct 91933 GTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || |||||||| || ||||||||||| |||| | |||| Sbjct 91371 GAGGCGGAGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 91312 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | ||||||||||| | ||| ||||| Sbjct 91311 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTC 91252 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| ||| ||||| | || | | | || || ||| || || || || Sbjct 91251 CTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGT 91192 Query 152066 AATAGTTTTGCCCGT 152080 ||||| || ||||| Sbjct 91191 GATAGTCTTTCCCGT 91177 >seq732 Length=233276 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| ||| || ||||||||||| ||| | || | ||||| Sbjct 60357 GAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 60416 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || |||||||| | ||||||||||| | || || ||||| || Sbjct 60417 CTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 60476 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| ||| ||| || ||||| || || || Sbjct 60477 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 60536 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 || |||||||| ||||| ||||||| |||||| || || Sbjct 60537 CTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCC 60575 >seq897 Length=151945 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | || | ||||| || || || || || ||||| Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | || || ||||| || || || || |||||| | || Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | | |||| || ||| || ||||| || || || ||||||||||| ||||||||||| Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 73523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153800990339140