Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 120 7e-22
seq732 111 4e-19
seq897 93.3 1e-13
>seq1144
Length=167757
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || ||||||||||| ||||| ||||| |||| | ||||
Sbjct 91655 GAGGCGGAGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGAAAGGGTTCG 91596
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | ||||||||||| | ||| |||||
Sbjct 91595 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTC 91536
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| ||| || || | || | | | || ||| ||| || || |||||
Sbjct 91535 CTTGTCCTGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGT 91476
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || ||||| ||||| ||||| ||||
Sbjct 91475 GATGGTCTTGCCAGTGAGGGTCTTGACGA 91447
Score = 118 bits (130), Expect = 2e-21
Identities = 160/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || || ||||||||||| | | ||||
Sbjct 91883 GAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGTGTTCG 91824
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| |||||||| || || | ||||||||||| | |||||
Sbjct 91823 GCCATCCTCAAGCTGCTTT--CCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCC 91766
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || || | || | |||| || ||| || || ||
Sbjct 91765 TCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCACCTCGAGG 91706
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| ||||| ||||||||||| ||||| | ||||||
Sbjct 91705 GTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665
Score = 114 bits (126), Expect = 3e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| ||||| || ||||| || || ||||||||||| | | ||||
Sbjct 92111 GAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTTCG 92052
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| |||||||| || || | ||||||||||| | |||||
Sbjct 92051 GCCATCCTCAAGCTGCTTT--CCGGCGAAAATGAGTCGCTGCTGGTCCGGAGGAATTCCC 91994
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || || | || | |||| || ||| || |||||
Sbjct 91993 TCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGACCTCAAGG 91934
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || || || | ||||||||| |||| |||||
Sbjct 91933 GTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
Score = 104 bits (114), Expect = 5e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || |||||||| || ||||||||||| |||| | ||||
Sbjct 91371 GAGGCGGAGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 91312
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | ||||||||||| | ||| |||||
Sbjct 91311 GCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTC 91252
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| ||| ||||| | || | | | || || ||| || || || ||
Sbjct 91251 CTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCGAGGGT 91192
Query 152066 AATAGTTTTGCCCGT 152080
||||| || |||||
Sbjct 91191 GATAGTCTTTCCCGT 91177
>seq732
Length=233276
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || ||||| ||| || ||||||||||| ||| | || | |||||
Sbjct 60357 GAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 60416
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || |||||||| | ||||||||||| | || || ||||| ||
Sbjct 60417 CTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 60476
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | |||| ||| ||| || ||||| || || ||
Sbjct 60477 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 60536
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| |||||||| ||||| ||||||| |||||| || ||
Sbjct 60537 CTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCC 60575
>seq897
Length=151945
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | || | ||||| || || || || || |||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | || || ||||| || || || || |||||| | ||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || ||||| || || || ||||||||||| |||||||||||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 73523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153800990339140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |