Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq732 183 6e-41
seq1144 154 3e-32
seq897 152 1e-31
seq1157 116 8e-21
>seq732
Length=233276
Score = 183 bits (202), Expect = 6e-41
Identities = 179/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || ||||| || | ||||| || || ||||||||||||||
Sbjct 60342 ACCACCACGAAGGCGGAGGACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 60401
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || |||||||| | || || ||||| ||
Sbjct 60402 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGG 60461
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 60462 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 60521
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||||||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 60522 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 60572
>seq1144
Length=167757
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || ||||| || | || ||||| ||||| |||||||| |
Sbjct 91664 ACCACCACGGAGGCGGAGGACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGA 91605
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || || |||||||| | ||| || ||||| ||
Sbjct 91604 AAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 91545
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| || ||||||| || ||| | ||||| || || |||| |||||
Sbjct 91544 GATGCCTTCCTTGTCCTGAATCTTTGACTTAACGTTGTCGATGGTATCAGAAGACTCGAC 91485
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||||||||||| ||||| || || | ||||| ||||
Sbjct 91484 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 91447
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || ||||| || | ||| || || || |||||||| ||||
Sbjct 91892 ACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 91833
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| || || | || || ||||| ||
Sbjct 91832 GAGTGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGG 91773
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| || |||||||| | || ||| | || |||||||| || | || ||
Sbjct 91772 AATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGACGACTCCAC 91713
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| || || | |||||| ||||| ||||||||
Sbjct 91712 CTCGAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 91665
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | ||| || || || |||||||| ||||
Sbjct 92120 ACCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 92061
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| || || | || || ||||| ||
Sbjct 92060 GAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCCGGAGG 92001
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| || |||||||| | || ||| | || |||||||| || | |||||
Sbjct 92000 AATTCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCAATAGTGTCGGATGACTCGAC 91941
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || |||||||| || ||||||||||| || || || |||||
Sbjct 91940 CTCAAGGGTAATCGTCTTTCCAGTCAAAGTCTTCACAAAGATTTGCAT 91893
Score = 138 bits (152), Expect = 2e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | || || || |||||||||||||| |
Sbjct 91380 ACCACCACGGAGGCGGAGGACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 91321
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || || |||||||| | ||| || ||||| ||
Sbjct 91320 GAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 91261
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| || ||||||| || ||| | ||||| || || || | |||||
Sbjct 91260 GATGCCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTATCGGAGGACTCGAC 91201
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077
||||| ||||| ||||| |||||||
Sbjct 91200 CTCGAGGGTGATAGTCTTTCCCGTCA 91175
>seq897
Length=151945
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || |||||||||||||| ||||| || || |||||||||
Sbjct 73701 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATC 73642
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || ||||| ||||||||||||||||| |||||||| | || || | |||
Sbjct 73641 AGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 73582
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 73581 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 73523
>seq1157
Length=14967
Score = 116 bits (128), Expect = 8e-21
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246
|||||||| ||| | ||| || | ||||| ||| | || ||||| | |||||
Sbjct 10937 GAAAAGGAATTCCTGACCGAGGCATTGCCTTGTGCTCTGCTTGGTATGAACTCGGATCTT 10996
Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306
||| ||| || ||||| ||||| || || ||| || | || || || || |||||||
Sbjct 10997 ATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACGAGAAG 11056
Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366
|| || || || | |||||||||| || |||||| || || ||| || || |||
Sbjct 11057 GTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAATATCTCCCTCGGTGGTAAGACT 11116
Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
|||||||| || |||||||| | ||||| |||| | |||||||
Sbjct 11117 AACTTCTTTGAGAAGCGTGTAGGTGATTACCAAAAGGCCGGTGT 11160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046721228796360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |