Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 147 5e-30
seq732 145 2e-29
seq897 131 4e-25
>seq1144
Length=167757
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || |||||||| || || || || |||||||||||||| || |||
Sbjct 91668 CAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCCGAC 91727
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 91728 ACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAG 91787
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| || ||||||||||| ||||| || ||||| | || || | ||||| ||| |
Sbjct 91788 CGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAACATT 91847
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 91848 CAGAAGGAGTCCACCCTCCACCTGGT 91873
Score = 145 bits (160), Expect = 2e-29
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| ||||| || |||||||||||||| || ||| || |||||||| |||||||| |
Sbjct 91177 ACGGGAAAGACTATCACCCTCGAGGTCGAGTCCTCCGATACCATCGACAACGTCAAGTCA 91236
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| ||||| ||||| ||||||||||| || || ||||| || || ||
Sbjct 91237 AAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAG 91296
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || || |||| || ||| |||| || || || || || ||
Sbjct 91297 CAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTCCAC 91356
Query 178125 CTTGT 178129
|| ||
Sbjct 91357 CTAGT 91361
Score = 143 bits (158), Expect = 6e-29
Identities = 151/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || ||||| |||||||| || || || |||||||
Sbjct 91447 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCTGATACCATCG 91506
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || ||||||||||||||| ||||| ||||| ||||||||||| || || |
Sbjct 91507 ACAACGTTAAGTCAAAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCA 91566
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || || || ||||| || ||||| | || ||| |||| || || |||| ||||
Sbjct 91567 TCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTTCCGACTACAATATCCAGAAAG 91626
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || || ||
Sbjct 91627 AGTCTACCCTCCACCTGGT 91645
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| ||| | || ||||| ||||| ||||| ||||| || || |||
Sbjct 91896 CAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCCGAC 91955
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 91956 ACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAG 92015
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| || ||||||||||| ||||| || ||||| | || || | ||||| ||| |
Sbjct 92016 CGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAACATT 92075
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 92076 CAGAAGGAGTCCACCCTTCACCTTGT 92101
>seq732
Length=233276
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || ||||||||||| |||||||| || |||
Sbjct 60566 CAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 60507
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 60506 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 60447
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||| || || || |||||||| ||||| | || || ||| || ||| ||
Sbjct 60446 CGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 60387
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 60386 CAGAAGGA 60379
>seq897
Length=151945
Score = 131 bits (144), Expect = 4e-25
Identities = 137/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || ||||| || || || |||||||| ||||| || ||| ||||||||
Sbjct 73522 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 73581
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 73582 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCT 73641
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || || ||||| ||||| | || || |||| || ||| |||| ||
Sbjct 73642 GATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 73701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203710533439960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |