Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1144 147 5e-30 seq732 145 2e-29 seq897 131 4e-25 >seq1144 Length=167757 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || || |||||||||||||| || ||| Sbjct 91668 CAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTCGAGGTGGAGTCGTCCGAC 91727 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| ||||| || || ||||| |||||||||||||| Sbjct 91728 ACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAG 91787 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || ||||||||||| ||||| || ||||| | || || | ||||| ||| | Sbjct 91788 CGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACACTCTCTGATTACAACATT 91847 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 91848 CAGAAGGAGTCCACCCTCCACCTGGT 91873 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || |||||||||||||| || ||| || |||||||| |||||||| | Sbjct 91177 ACGGGAAAGACTATCACCCTCGAGGTCGAGTCCTCCGATACCATCGACAACGTCAAGTCA 91236 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| ||||| ||||| ||||||||||| || || ||||| || || || Sbjct 91237 AAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAG 91296 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || || |||| || ||| |||| || || || || || || Sbjct 91297 CAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTCCAC 91356 Query 178125 CTTGT 178129 || || Sbjct 91357 CTAGT 91361 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||| |||||||| || || || ||||||| Sbjct 91447 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCTGATACCATCG 91506 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || ||||||||||||||| ||||| ||||| ||||||||||| || || | Sbjct 91507 ACAACGTTAAGTCAAAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCA 91566 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| || || || ||||| || ||||| | || ||| |||| || || |||| |||| Sbjct 91567 TCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTTCCGACTACAATATCCAGAAAG 91626 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 91627 AGTCTACCCTCCACCTGGT 91645 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||| | || ||||| ||||| ||||| ||||| || || ||| Sbjct 91896 CAAATCTTTGTGAAGACTTTGACTGGAAAGACGATTACCCTTGAGGTCGAGTCATCCGAC 91955 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| ||||| || || ||||| |||||||||||||| Sbjct 91956 ACTATTGACAACGTTAAGTCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGACCAGCAG 92015 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || ||||||||||| ||||| || ||||| | || || | ||||| ||| | Sbjct 92016 CGACTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCTGATTACAACATT 92075 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 92076 CAGAAGGAGTCCACCCTTCACCTTGT 92101 >seq732 Length=233276 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 60566 CAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 60507 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 60506 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 60447 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| || || || |||||||| ||||| | || || ||| || ||| || Sbjct 60446 CGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 60387 Query 178104 CAAAAAGA 178111 || || || Sbjct 60386 CAGAAGGA 60379 >seq897 Length=151945 Score = 131 bits (144), Expect = 4e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || ||||| || || || |||||||| ||||| || ||| |||||||| Sbjct 73522 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 73581 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 73582 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCT 73641 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || || ||||| ||||| | || || |||| || ||| |||| || Sbjct 73642 GATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 73701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203710533439960