Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq12 156 9e-33 seq7 100 6e-16 >seq12 Length=1358207 Score = 156 bits (172), Expect = 9e-33 Identities = 188/253 (74%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | ||| ||||| || | ||| || |||| ||| || Sbjct 114358 ATCATCACCGATGCTGTCACTATCGAGAAGGAATTTCTCACTGAAGCGCTTCCCTGT-GC 114416 Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| | ||||||||| | || || ||| || || || || ||||||||||| || | Sbjct 114417 TTTACTCGGCATGAACTCCGATCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCT 114476 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | ||||||| || || | ||||| |||||||| |||| ||||||||| | |||||||| Sbjct 114477 TCTTGTTGCCCTCGGCAATGAGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGA 114536 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 |||||| || || ||||||||||||||||| ||||||||| |||||||||||| Sbjct 114537 AAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAGAA 114596 Query 230625 GCCTGGTGTGATG 230637 | ||||||||| Sbjct 114597 AGCCGGTGTGATG 114609 >seq7 Length=2071471 Score = 100 bits (110), Expect = 6e-16 Identities = 201/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 282393 ACGATAGGTGTGATGAACTTCTT-CAAGAAACCTGGAAT-TTCTAG-GAGACTGGGAAAA 282449 || || || |||||||| ||||| ||||||||| ||||| ||| | | || ||||| Sbjct 1458934 ACAATTGGCGTGATGAA-TTCTTGCAAGAAACCGGGAATCTTCAACAGCGAA-GGGAACT 1458991 Query 282450 CAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCG 282509 | || |||| |||||| || | ||||| || ||| |||| || |||| || Sbjct 1458992 GAACT-TGGAGAAAGTTGATCAGGAGACCCTTGATATGACTTCCATCGTGATCCTGATCT 1459050 Query 282510 GTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTT 282569 ||||||||||||| |||||| || | ||| ||||| ||||||| | | | Sbjct 1459051 GTCATGATCATCAAATGACCATACCGGAGACCCTTGGTGTCGGTGTACACCTGCTTGTGT 1459110 Query 282570 TGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACA 282629 | |||||||||| ||||||| |||||| | ||||||| || | | Sbjct 1459111 TTCAGGCCCAAAAACTGTTTGATGTTTTGGATTTCCTGATTCTTTGAAATCTGATCAATT 1459170 Query 282630 GATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATA 282679 || ||||| || ||||| |||| |||||| || || |||||||||||||| Sbjct 1459171 GAGGCATCACGCACGTTGAGCATCTTACCACGAAGTGGAAAAACACCATA 1459220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817304635220