Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq12 156 9e-33
seq7 100 6e-16
>seq12
Length=1358207
Score = 156 bits (172), Expect = 9e-33
Identities = 188/253 (74%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || || | ||| ||||| || | ||| || |||| ||| ||
Sbjct 114358 ATCATCACCGATGCTGTCACTATCGAGAAGGAATTTCTCACTGAAGCGCTTCCCTGT-GC 114416
Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| | ||||||||| | || || ||| || || || || ||||||||||| || |
Sbjct 114417 TTTACTCGGCATGAACTCCGATCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCT 114476
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| ||||||| || || | ||||| |||||||| |||| ||||||||| | ||||||||
Sbjct 114477 TCTTGTTGCCCTCGGCAATGAGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGA 114536
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
|||||| || || ||||||||||||||||| ||||||||| ||||||||||||
Sbjct 114537 AAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAGAA 114596
Query 230625 GCCTGGTGTGATG 230637
| |||||||||
Sbjct 114597 AGCCGGTGTGATG 114609
>seq7
Length=2071471
Score = 100 bits (110), Expect = 6e-16
Identities = 201/290 (69%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 282393 ACGATAGGTGTGATGAACTTCTT-CAAGAAACCTGGAAT-TTCTAG-GAGACTGGGAAAA 282449
|| || || |||||||| ||||| ||||||||| ||||| ||| | | || |||||
Sbjct 1458934 ACAATTGGCGTGATGAA-TTCTTGCAAGAAACCGGGAATCTTCAACAGCGAA-GGGAACT 1458991
Query 282450 CAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCG 282509
| || |||| |||||| || | ||||| || ||| |||| || |||| ||
Sbjct 1458992 GAACT-TGGAGAAAGTTGATCAGGAGACCCTTGATATGACTTCCATCGTGATCCTGATCT 1459050
Query 282510 GTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTT 282569
||||||||||||| |||||| || | ||| ||||| ||||||| | | |
Sbjct 1459051 GTCATGATCATCAAATGACCATACCGGAGACCCTTGGTGTCGGTGTACACCTGCTTGTGT 1459110
Query 282570 TGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACA 282629
| |||||||||| ||||||| |||||| | ||||||| || | |
Sbjct 1459111 TTCAGGCCCAAAAACTGTTTGATGTTTTGGATTTCCTGATTCTTTGAAATCTGATCAATT 1459170
Query 282630 GATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATA 282679
|| ||||| || ||||| |||| |||||| || || ||||||||||||||
Sbjct 1459171 GAGGCATCACGCACGTTGAGCATCTTACCACGAAGTGGAAAAACACCATA 1459220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057817304635220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |