Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 123 3e-23 >seq8 Length=1962940 Score = 123 bits (136), Expect = 3e-23 Identities = 269/398 (68%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||| ||||| ||| | | |||||| ||||| ||| |||| | | ||||| ||||| Sbjct 1138629 ACGTAAAACTGAGCAAAC-ATGTGGCAAGGCGGAAGGACCATCTTGCGAAGGTCGGCCGG 1138687 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||||| |||| ||| | | | | |||||| | | || ||||| Sbjct 1138688 GTTCCACGCGGTCAGGATGAGACGACGGTCGTAAGGGTTCGTGCGAAGCTTGTGAATCAG 1138747 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || |||||||| || ||||| || ||| || |||||| |||| || ||| |||| Sbjct 1138748 CTCAGCAAGCTGGTCGACTCCCTGGCCGGTGTAGTCAGTCTTGTAGTCGACATACTCGGC 1138807 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 || ||||| | ||||||||| ||||| ||||| || || || || ||| | ||| Sbjct 1138808 GCCAAAGTGTCGCCACTGGAAGCCGTAAACGGGGCCAAGATCGCCCTCCTCACGGTGAGT 1138867 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--C 146166 || || | | ||||| || || || || || | ||||||||||||| || | Sbjct 1138868 TAGACCAAGGTTGTCCAGGAATTCGCGTGAGCCATTTCCATCCCAGATCTTGATACCAGC 1138927 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226 ||||| |||| ||||| ||| ||| |||||||||||||| ||| | | Sbjct 1138928 CTCGCTCAGAG--ACTTGGAAGATGTGTTGCCCTCGATGAACCAGAGCAATTCTGCAATC 1138985 Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || | | |||||| | ||| ||||| || || || Sbjct 1138986 ACGGCTCGAGTGAAGACACGCTTCGTGGTGAGAAGCGG 1139023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073156275760