Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 5e-32
seq5 141 1e-28
seq8 138 1e-27
seq2 138 1e-27
seq461 105 7e-18
>seq12
Length=1358207
Score = 152 bits (168), Expect = 5e-32
Identities = 271/389 (70%), Gaps = 6/389 (2%)
Strand=Plus/Plus
Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028
|| ||| ||| | ||||||| |||||||| |||| |||||| | | || || || ||
Sbjct 114085 CCTTGCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGTCCACC 114144
Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088
|||| | ||||| || ||||| || || || |||||| ||||||| || |||
Sbjct 114145 TTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTTT 114204
Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148
|| |||| || ||||||||||| |||||||||||||| || |||| ||| |||||
Sbjct 114205 GCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAAACGAA 114264
Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT--GTTCAAGCATT 117206
|| |||||| | || ||||| ||||| |||||| || || |||| || | ||
Sbjct 114265 CTGATCTCCCGTGATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCACTCTCACCTT 114324
Query 117207 TGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCG 117266
| || | | | | || | | ||| ||| ||| ||||||| || ||| | ||||
Sbjct 114325 AAGGGCCGTGCCAGCAAGC-AAGTGATTCA-GGATATCATCACCGATGCTGTCACTATCG 114382
Query 117267 AGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACG 117325
|| || || ||||| ||||||| | || |||| | | || || | || | |||
Sbjct 114383 AGAAGGAATTTCTCACTGAAGCGCTTCCCTGTGC-TTTACTCGGCATGAACTCCGATCTC 114441
Query 117326 ATGTCGCAATACATCGAGTTCGTCGCCGA 117354
||| |||||| || |||||||| |||||
Sbjct 114442 ATGAAGCAATATATTGAGTTCGTAGCCGA 114470
Score = 123 bits (136), Expect = 3e-23
Identities = 201/286 (70%), Gaps = 5/286 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||| |||||| ||||||||||| | ||||| | || ||
Sbjct 113698 ATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTGCTGAGGAAATTGATCTT 113757
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | |||||| | ||| |||| | |||||| || |
Sbjct 113758 TCCAAGGATTTGCATGACTGGAACAACCGCCTGAATGCAGACGAGCAGTTCTTTGTTTCC 113817
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811
||| | || || || || ||||| || ||||||||||||||||| |||||||||||
Sbjct 113818 CACATTCTTGCTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGA 113877
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | || || ||| | | ||||| || || ||||| ||||| |||||| ||
Sbjct 113878 TTTAGCGC-TGAAGTTCAGATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATGAT 113936
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||| | ||||| || | || || ||||||||||| |||
Sbjct 113937 GGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATAC 113982
>seq5
Length=2272025
Score = 141 bits (156), Expect = 1e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || || |||||| | || || || |
Sbjct 1174881 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1174822
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | ||||| || || | ||||| |||||||||||| |||||
Sbjct 1174821 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 1174762
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| ||||| |||| || || || ||||| || |||| |||||||| | |||||||
Sbjct 1174761 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGAGCGACTAC 1174702
Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||||| ||| || ||
Sbjct 1174701 AACATCCAGAAGGAGAGCACCCTCCA 1174676
>seq8
Length=1962940
Score = 138 bits (152), Expect = 1e-27
Identities = 141/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| | || ||||| || | |||| | |
Sbjct 146363 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 146422
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| |||||||| ||| |||||||||| || ||
Sbjct 146423 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 146482
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || || | ||||||||| |||||||||||||||||||
Sbjct 146483 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 146542
Query 40879 GAGG 40882
| ||
Sbjct 146543 GTGG 146546
>seq2
Length=4202288
Score = 138 bits (152), Expect = 1e-27
Identities = 145/188 (77%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||||||||| |||||||| | || ||||| || |||||| | | | |||| |||||
Sbjct 1893935 TCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAAG 1893877
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| |||| ||||| |||||||| ||| |||||||||| || || |||| || ||
Sbjct 1893876 TCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTTGCTGGT 1893817
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| || |||||| |||||||||||||||||||||| |||| ||
Sbjct 1893816 AAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTC 1893757
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 1893756 CACCTGGT 1893749
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || ||||| ||||| |||||||| | || || || || |||||| | |
Sbjct 1893663 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTTGAGTCCTCCGACACCATCG 1893604
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| || || | ||||| |||||||| ||| |||||||||| || || |
Sbjct 1893603 ACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGA 1893544
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| | ||| || || ||||| || |||| ||||| || |||||||||||| |||||||
Sbjct 1893543 TTTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATTCAGAAGG 1893484
Query 40880 AGGCCACGCTGCATCTAGTGTTGCG 40904
| |||| || || || || ||||
Sbjct 1893483 AATCCACCCTCCACCTTGTCCTGCG 1893459
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || ||||| || | || || || | |
Sbjct 1893445 ATGCAAATCTTCGTCAAGACCTTAACTGGAAAGACCATTACTCTGGAGGTGGAGTCATCT 1893386
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| ||||| ||||| |||||| ||||||||
Sbjct 1893385 GATACCATCGACAATGTGAAGTCTAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 1893326
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || || || ||||| || |||| |||||||| | ||||||||||
Sbjct 1893325 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGAGCGACTACAAC 1893266
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| |||||||| |||| || || || ||
Sbjct 1893265 ATTCAGAAGGAATCCACCCTCCACCTTGT 1893237
>seq461
Length=561
Score = 105 bits (116), Expect = 7e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| | || || |||||||||||| | || || || | ||
Sbjct 130 ATGCAGATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCTTGGAGGTGGAGAGCTCC 189
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || || || ||| | |||||
Sbjct 190 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 248
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| ||| || |||||||| || |||| | |||||| |||||||||
Sbjct 249 ACAGAGATTGATCTTCGCCGGAAAACAGCTAGAAGACGGCAGAACCCTCGCCGACTACAA 308
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||||||| | || || |||
Sbjct 309 CATCCAGAAGGAATCAACCCTCCAT 333
Score = 86.0 bits (94), Expect = 6e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 40789 GAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAG 40848
|| || |||||| | || |||||| || | |||| ||| || |||||||| || ||||
Sbjct 1 GAAGGTATCCCCCCAGATCAGCAAAGATTGATCTTCGCCGGAAAACAGCTAGAAGACGGC 60
Query 40849 CGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|| |||||| ||||||||||||||| |||||| | || || |||
Sbjct 61 CGTACCCTCGCCGACTACAACATCCAAAAGGAGTCAACCCTCCAT 105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515216018521440
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