Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 1e-24
>seq4
Length=2550084
Score = 129 bits (142), Expect = 1e-24
Identities = 401/614 (65%), Gaps = 15/614 (2%)
Strand=Plus/Plus
Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892
||||| || |||||| |||||| ||||| || || ||||||||||| || || |||
Sbjct 816065 TTCAAGACTCTGGAGCGATCGTACCTCCTTAAGATCGATGGCAAGATTGTCGAGCGACCA 816124
Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952
||||||||| | ||||| || |||| || || |||||||| ||| | || |||
Sbjct 816125 CAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTCCTC 816184
Query 248953 GAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010
||||| |||| | ||| |||| | | || || ||| | || || |||||||
Sbjct 816185 GAGACCTACAACCTCATGTCCATGAA--GTTTTTTACCCACGCCTCCCCCACCCTCTTCA 816242
Query 249011 ACGCCGGTA-CCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069
|||| |||| || ||| | ||||| || ||||| | ||| |||| | || |||
Sbjct 816243 ACGCTGGTACCCCTCAGC-CCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGAC 816301
Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCG 249126
| || || || || ||||| || | ||||| || | ||| || || | ||
Sbjct 816302 AGCATTGAGGGTATCTACGACACCCTCA---AGACGTGTGCCATGATCTCCAAGATGGCT 816358
Query 249127 GGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACA 249186
|| || ||||||||| |||| | ||||| || | ||||| ||||| |||||
Sbjct 816359 GGTGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTCATACATTGCCGGTACC 816418
Query 249187 AATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246
||||| | ||||| || ||| | ||||| ||| | ||| || ||| |
Sbjct 816419 AATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTAC 816478
Query 249247 ATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303
| |||||| || | ||| || | |||||||| || | || ||||||
Sbjct 816479 GTGGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCAC 816538
Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363
|||||| | || |||||||| ||| | |||||| |||| || || | ||||
Sbjct 816539 GCCGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCC 816598
Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGAC 249423
||||| | ||| || || ||| || | || |||||||| || ||| || ||
Sbjct 816599 CGTGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAAC 816658
Query 249424 GGCGATTGGACGCT 249437
|| || ||||| ||
Sbjct 816659 GGTGACTGGACTCT 816672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073759603729792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |