Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 129 1e-24 >seq4 Length=2550084 Score = 129 bits (142), Expect = 1e-24 Identities = 401/614 (65%), Gaps = 15/614 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || |||||| |||||| ||||| || || ||||||||||| || || ||| Sbjct 816065 TTCAAGACTCTGGAGCGATCGTACCTCCTTAAGATCGATGGCAAGATTGTCGAGCGACCA 816124 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| || |||| || || |||||||| ||| | || ||| Sbjct 816125 CAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTCCTC 816184 Query 248953 GAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 ||||| |||| | ||| |||| | | || || ||| | || || ||||||| Sbjct 816185 GAGACCTACAACCTCATGTCCATGAA--GTTTTTTACCCACGCCTCCCCCACCCTCTTCA 816242 Query 249011 ACGCCGGTA-CCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069 |||| |||| || ||| | ||||| || ||||| | ||| |||| | || ||| Sbjct 816243 ACGCTGGTACCCCTCAGC-CCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGAC 816301 Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCG 249126 | || || || || ||||| || | ||||| || | ||| || || | || Sbjct 816302 AGCATTGAGGGTATCTACGACACCCTCA---AGACGTGTGCCATGATCTCCAAGATGGCT 816358 Query 249127 GGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACA 249186 || || ||||||||| |||| | ||||| || | ||||| ||||| ||||| Sbjct 816359 GGTGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTCATACATTGCCGGTACC 816418 Query 249187 AATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246 ||||| | ||||| || ||| | ||||| ||| | ||| || ||| | Sbjct 816419 AATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTAC 816478 Query 249247 ATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303 | |||||| || | ||| || | |||||||| || | || |||||| Sbjct 816479 GTGGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCAC 816538 Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363 |||||| | || |||||||| ||| | |||||| |||| || || | |||| Sbjct 816539 GCCGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCC 816598 Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGAC 249423 ||||| | ||| || || ||| || | || |||||||| || ||| || || Sbjct 816599 CGTGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAAC 816658 Query 249424 GGCGATTGGACGCT 249437 || || ||||| || Sbjct 816659 GGTGACTGGACTCT 816672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073759603729792