Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 273 2e-68
seq2 93.3 4e-14
seq5 89.7 5e-13
>seq4
Length=2550084
Score = 273 bits (302), Expect = 2e-68
Identities = 1188/1855 (64%), Gaps = 50/1855 (3%)
Strand=Plus/Minus
Query 22144 GGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGA 22203
||| || || || |||||||| ||||| ||||| | |||||| || || || ||
Sbjct 817849 GGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCT 817790
Query 22204 CGTCAATTTT--CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261
|| ||| || |||| | || | ||||| | |||| |||||| || ||
Sbjct 817789 GGT-AATCTTGCCCATGG-TGGGGTCTTTCATGTGGATGTTGAGGGACTGAGATTGGTCA 817732
Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACG 22321
|| || || ||||| ||||| ||||| | | | ||| || || ||||| |||
Sbjct 817731 ATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACG 817672
Query 22322 GTCTTGTACAGTTGCCTGATC-TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTT 22380
|||||||| || |||| | | || || || ||| |||||| ||| ||||
Sbjct 817671 GTCTTGTAGAGA-GCCTTAACATCCGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGTC 817613
Query 22381 ATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440
| ||||| ||||| || | ||| ||| | || ||| | | ||| ||
Sbjct 817612 TTCAGCAATGATTCTGTTTTTCATAGCATCCGACCATAGGCCCATGTCAACGAGATCCTT 817553
Query 22441 GACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTT 22500
|| || |||| || || || |||||||||| | ||| || || ||| |||||
Sbjct 817552 GAGGAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTT 817493
Query 22501 GGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGG 22560
||||||| | || ||||| | || ||||| ||||| ||||||| || ||| || ||
Sbjct 817492 GGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGG 817433
Query 22561 CATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGC 22618
||| || |||| || || ||| | | ||||||| |||| | | ||| ||||
Sbjct 817432 CATGGGTGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTTGACCTGCT-CTCG-GAGC 817375
Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACG 22678
| ||||||||| || ||||| || |||| || |||||| ||| | || | |
Sbjct 817374 GGCTCCCAGTCCCAGAGCTCGGAAGGTTTCACGTT---CCACATGTCGAACTGAAGGATA 817318
Query 22679 CCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCG 22738
|| | || || ||| | | | || ||| ||||| | | |||||| | |
Sbjct 817317 CCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCT-G 817259
Query 22739 CA-GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGC 22797
|| | ||| ||| || ||| ||| |||||||| ||||||| ||||||| ||
Sbjct 817258 CACGGACGCAGTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACG 817199
Query 22798 GGC----GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCT 22853
|| || ||| || | ||||| || | | ||| || || || | |||||
Sbjct 817198 AGCCTCAGGGGAC----TCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCCT 817143
Query 22854 GAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAA 22909
| || || | |||||| || |||| || || || |||| ||| || | |
Sbjct 817142 GGACACCGACACCGATGGGACGGTGGCGCATGTTG----CTGTTGCGAGCCTCAGGAACA 817087
Query 22910 GGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNN 22969
|| || || ||| || | |||||| ||| | | ||| | | || |
Sbjct 817086 GGGTAATGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACAGTCTGGGTAACCTCG 817027
Query 22970 NNNNNNNNNTCAAAGTCGTAA-ACGCCCGATTGTA--CAACAAACTTGTTGAC--GGCGA 23024
| ||||| ||| | | ||||| |||| || || | | ||| |
Sbjct 817026 TGCAACTTTTGGAAGTCATAACAATCGTTGTTGTAGTCAACGAA--TGAAGGCAGGGCCA 816969
Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084
||||||||| ||||| ||||| || || || || |||| || | ||||| || |
Sbjct 816968 GCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGC 816909
Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTG-CACGAA 23143
| || ||| | || ||||| | || |||||||||| || || ||| || ||
Sbjct 816908 ACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGA- 816850
Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203
|||||||| |||||| | || | || ||||| ||| | || | || || |||
Sbjct 816849 TCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAG 816790
Query 23204 ATAGTCTGAGCGTGAACA--CGT-CG-CACGTACCTGCCTTCTTCCTCGTACTTTTGGTA 23259
| |||| || | | | | || | | |||| ||||||| | ||||| | ||
Sbjct 816789 AGCTTCTGGGCCTTCATGGTCTTGCGACCCTTACCGGCCTTCT----CATACTTCTCATA 816734
Query 23260 CAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACAT 23319
||| || ||||| || | ||||| || ||||| ||||| || | | | || |||||
Sbjct 816733 CAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACAT 816674
Query 23320 GAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379
|||| |||| || || || || || |||| || ||||| || |||||||| ||
Sbjct 816673 GAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGC 816614
Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439
| ||||| || ||||| || ||||| || || ||| |||||| | || | ||
Sbjct 816613 GAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAA 816554
Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499
|| || || || || ||||| ||||| ||||| | ||| || || || |||| ||| ||
Sbjct 816553 CTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTT 816494
Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559
||| ||||| || ||||| || || ||||||||| | || | ||||| || || |||
Sbjct 816493 GCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACC 816434
Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTG 23619
||||| | || || || | ||||| |||| || | ||| ||||
Sbjct 816433 ATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTT 816374
Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679
|| ||| ||||| || || || || ||||| || || || || |||||||||||
Sbjct 816373 GAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGGGTGTCGTAGAT 816314
Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGG 23739
||||| ||||||||||| || | | |||||||| || ||||| | || | | ||
Sbjct 816313 ACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGG 816254
Query 23740 CGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACATTAGAT 23798
||| | || ||| || || ||| |||||| ||||| | | || | ||||| || |
Sbjct 816253 GGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCA-TGGACATGAGGT 816195
Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858
|||| || |||| | | || ||||| || || ||||| | | ||| ||||| |
Sbjct 816194 TGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGACACGCATGA 816135
Query 23859 TCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918
|||||| || |||| |||||| | ||| | || || | || || || || | ||
Sbjct 816134 TCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACGATCGCTCCA 816075
Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
|| || || || || || | ||||| |||||||| || | || ||||| ||
Sbjct 816074 GAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCAGA 816020
>seq2
Length=4202288
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || ||||| || ||||| | || ||||| | ||||||| |||
Sbjct 1893663 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTTGAGTCCTCCGACACCATCG 1893604
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || | || ||||||||| ||| | || || |||||||||||||| |
Sbjct 1893603 ACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGA 1893544
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| ||||| || || ||| | || ||| ||| || ||| || |||||||| || |
Sbjct 1893543 TTTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATTCAGAAGG 1893484
Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| || || || || || || |||| | || ||||
Sbjct 1893483 AATCCACCCTCCACCTTGTCCTGCGACTTCGTGGTGGTA 1893445
>seq5
Length=2272025
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| || || || || ||||||||| | || || || |
Sbjct 1174881 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1174822
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 1174821 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 1174762
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || || ||||| || ||| | || ||| || ||||||| ||
Sbjct 1174761 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGAGCGACTAC 1174702
Query 31370 AACATTCAAAAAGA 31383
||||| || || ||
Sbjct 1174701 AACATCCAGAAGGA 1174688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763647392480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |