Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 2e-21
seq4 111 3e-19
>seq12
Length=1358207
Score = 118 bits (130), Expect = 2e-21
Identities = 294/445 (66%), Gaps = 15/445 (3%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
||||||||||||||||||| || || |||||||| |||||||| || || ||||| ||||
Sbjct 114158 TTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTTTGCTTCCATCTTCT 114217
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| ||||||| | || | |||||||| | |||| ||| || || | || || | |
Sbjct 114218 GGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAAACGAACTGATCTCCCGTG 114277
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTG 102089
| || || || || |||||| || ||| |||| | | ||||| ||
Sbjct 114278 ATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCACTCTCACCTTAAGGGCCGTG--- 114334
Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149
||| |||| || ||||| || || |||| || || ||| || || | |
Sbjct 114335 -----CCAGCAAG-CAAGTGATTCAGGATATCATCACCGATGCTGTCACTATCGAGAAGG 114388
Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209
|||||||||| | | || || | ||| | || ||||||| | | | |||| |
Sbjct 114389 AATTTCTCACTGAAGCGCTTCCCTGTGCTTTACTCGGCATGAACTCCGATCTCATGAAGC 114448
Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATA 102269
| || ||||| || || || ||| || | |||| | || || ||| || |
Sbjct 114449 AATATATTGAGTTCGTAGCCGATCGTCTTCTTGTTGCCCTCGGCAATGAGAAGGTGTACA 114508
Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329
| ||| ||||||||| || ||||| || ||||| |||| ||||||||||| |
Sbjct 114509 AGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCGGTGGCAAGACCAACTTCT 114568
Query 102330 TTGAAAAGAGAGTCGCCGAGTATCA 102354
| || ||| | |||| || |||||
Sbjct 114569 TCGAGAAGCGTGTCGGTGACTATCA 114593
>seq4
Length=2550084
Score = 111 bits (122), Expect = 3e-19
Identities = 413/641 (64%), Gaps = 10/641 (2%)
Strand=Plus/Minus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
|||||| ||||| ||||| |||| |||||| ||||| | | |||| ||||||||||||
Sbjct 816748 CTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCA 816689
Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCCATGAAGAG 94523
||| | ||||||||| || | ||| | || |||| || | || |||||| ||
Sbjct 816688 CTCATTGGGGCACATGAGAGTCCAGTCA---CCGTTCTTCTCGACACGCTTCATGAACAG 816632
Query 94524 ATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCATT 94583
||||| | ||| | || |||| | ||| | | | | ||||| || ||| ||
Sbjct 816631 ATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTT 816572
Query 94584 CTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATAGATGGCTGC 94643
||| | | ||| | || || || || |||||| || ||||||||
Sbjct 816571 CTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAA 816512
Query 94644 AGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTTAAAGATTTG 94703
||| || | ||||| || |||||| || | ||| | ||| |||| |
Sbjct 816511 AGCACCGGGTCGCTTGTTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACG 816452
Query 94704 GAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGACGAAATGGGGCTTCCTTTTGC 94763
|| | | ||| |||| | ||||||| | | |||| || ||||
Sbjct 816451 AAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGC 816392
Query 94764 CCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC 94823
| | || | || || |||| || ||||| |||||||||| || || |
Sbjct 816391 GCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACACGT 816332
Query 94824 CTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGA 94883
||| || || || || |||||||||||||| || || | | | | | | |||||| ||
Sbjct 816331 CTTGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGA 816272
Query 94884 GGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAAT 94942
|| || ||||| || | || ||| || || || |||||||| || |||||||||
Sbjct 816271 AGATAGCTGGGGCTGAG-GGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAA 816213
Query 94943 AGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATG 95001
| | | | |||||||| | || || || | |||| | |||||| | | || | ||
Sbjct 816212 ACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCAG-ATA 816154
Query 95002 CCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042
|| |||| |||||||| ||||||| ||| || ||||| ||
Sbjct 816153 CCCACAGAGACACGCATGATCATGTGCTGTGGTCGCTCGAC 816113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989577736551770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |