Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 3e-24
seq12 98.7 1e-15
>seq4
Length=2550084
Score = 127 bits (140), Expect = 3e-24
Identities = 534/832 (64%), Gaps = 26/832 (3%)
Strand=Plus/Minus
Query 63065 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124
|||||| ||||| ||||| || ||||||| ||| |||||| ||| | ||| || | |||
Sbjct 816850 ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCA 816791
Query 63125 GACGACTC-GAGCCTTTATTATA----GATTTGTATCTCCTTTCTCTTTCGTATAGAGTA 63179
|| | || | ||||| || | || || | | ||||| | | | | |
Sbjct 816790 GA-GCTTCTGGGCCTTCATGGTCTTGCGACCCTTACCGGCCTTCTCATACTTCTC----A 816736
Query 63180 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACAC 63239
||||| || ||||| || || | || | | | | ||| || |||| || |||
Sbjct 816735 TACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCAC 816676
Query 63240 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63299
|| | | ||| || |||| | || || || ||||| || |||||||| ||||| ||
Sbjct 816675 ATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGC 816616
Query 63300 GCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63359
|| | || | ||| | | || || || ||||| ||||| || ||||||
Sbjct 816615 GCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGG 816556
Query 63360 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63419
||| | | | ||| | ||||| || || | ||| ||||| | | | || || || |||
Sbjct 816555 AACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTG 816496
Query 63420 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63479
|| || ||||| || | ||| | ||| ||||| || | || | | ||| || | | |
Sbjct 816495 TTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACA 816436
Query 63480 CCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATT 63539
|| || || ||||||||||||||| || || || | || || || | |
Sbjct 816435 CCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGAT-TCGGTGGAC 816377
Query 63540 GAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCAT 63597
| | ||||| || || || ||||| || ||||| | || || ||| || | ||||| |
Sbjct 816376 GTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGT 816318
Query 63598 AGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63657
|||| || || ||||| || || |||||| || | || || ||| | ||| |
Sbjct 816317 AGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCT 816258
Query 63658 GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63717
||| || || || || || | ||| || || ||||| ||||| | || || | |
Sbjct 816257 GAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGA 816198
Query 63718 GATTGTACGTCTC----AATAGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGA 63771
| ||||| ||||| | ||| || ||| | |||| || || || | ||
Sbjct 816197 GGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCA------GATACCCACAGAGA 816144
Query 63772 CACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGG 63831
||||||| | ||||||||| |||| || ||||| ||| | || || | | ||| |
Sbjct 816143 CACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACG 816084
Query 63832 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63883
|| |||| ||| || || || || || | ||| ||||| || || ||
Sbjct 816083 ATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATA 816032
>seq12
Length=1358207
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| ||| |||||| ||||| || | || | |||||| || || || |
Sbjct 114305 CAAGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAA 114246
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| ||||| ||||| || ||||| || |||||||| || | || ||||||
Sbjct 114245 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAG 114186
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33730
|| || ||||||||||||||||||| |||
Sbjct 114185 ATGCCCTCTACTGCAGCAAAGGCAACAAG 114157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813710876320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |