Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 5e-34
seq12 107 3e-18
>seq4
Length=2550084
Score = 159 bits (176), Expect = 5e-34
Identities = 614/948 (65%), Gaps = 26/948 (3%)
Strand=Plus/Minus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| || || || || ||||| || |||| || | |||| || |||||||||||
Sbjct 816966 GAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCAC 816907
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA-CACGCATC 79739
||||| | ||| || || | || | || || ||||| ||| || | |||
Sbjct 816906 AGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATG-ATC 816848
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| ||||| ||||| || ||||||| ||| |||||| ||| | ||| || | |||||
Sbjct 816847 CTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGA- 816789
Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCTCTTTTCT--CTT-TCGTATTGTGTATATA 79855
| || | ||||| || | |||| | ||| | ||| || || | ||| |
Sbjct 816788 GCTTCTGGGCCTTCATGGT---CTTGCGACCCTTACCGGCCTTCTCATACTTCTCATACA 816732
Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915
| || ||||| || || | |||| | | ||||| || || | || ||||| |
Sbjct 816731 AGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGA 816672
Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 79975
| ||| || || | | || || || ||||| || |||||||| ||||| || || |
Sbjct 816671 GAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGA 816612
Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035
|| | ||| | || || ||| || ||||| ||||| || |||||||||
Sbjct 816611 GGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACT 816552
Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095
| | | ||| | ||||| || || | ||| ||||| | | | || ||||| ||||| |
Sbjct 816551 CGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGC 816492
Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155
| ||||| || | ||| | ||| ||||| || | || | | ||| || | | |||||
Sbjct 816491 CACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCAT 816432
Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT- 80214
|||| ||||||||||| |||| || || || | || || || | | | |
Sbjct 816431 TGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGAT-TCGGTGGACGTTG 816373
Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGAT 80273
||||| || || || ||||| || ||||| | || || ||| || | || || |||||
Sbjct 816372 AGACCGATGCCACCAGCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGTAGAT 816314
Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333
||||| ||||| || || |||||| || | || || ||| | ||| | ||
Sbjct 816313 ACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGG 816254
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
|| || || || || | ||| || || ||||| ||||| | || |||| || ||
Sbjct 816253 GGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAGGTT 816194
Query 80394 GTACGTCTC----AATAGCT-GAT-TCTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||| ||||| | ||| ||| || | |||| || || || | ||||||
Sbjct 816193 GTAGGTCTCGAGGACACGCTCGATGTCATCACCCCA------GATACCCACAGAGACACG 816140
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507
||| | ||||||||| |||| || || |||||| || || || | | ||| |||
Sbjct 816139 CATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACGATCG 816080
Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 80555
|||| ||| || || || || || | ||| ||||| || || ||
Sbjct 816079 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATA 816032
>seq12
Length=1358207
Score = 107 bits (118), Expect = 3e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||| ||| |||||| ||||| || | || |||||||| || || || |
Sbjct 114305 CAAGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAA 114246
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| ||||| ||||| || ||||| || ||||| ||||| | ||| ||||||
Sbjct 114245 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAG 114186
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|| || |||||||| ||||||||||||||
Sbjct 114185 ATGCCCTCTACTGCAGCAAAGGCAACAAG 114157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264364690160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |