Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 84.2 3e-11
>seq4
Length=2550084
Score = 84.2 bits (92), Expect = 3e-11
Identities = 193/290 (67%), Gaps = 3/290 (1%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
||||| |||||||| | | ||||| | ||||| || ||||||||||| || || |||
Sbjct 817878 GTAAATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGA 817819
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| || |||| ||| || ||||| || || | ||| | | || || |||
Sbjct 817818 CCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCTTTCATG 817759
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
|| || || | |||||| ||| || |||||||| || | ||| |||||||| | | |
Sbjct 817758 TGGATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACG 817699
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
| | || | ||| ||||| | || || || | ||||| ||| | || | |
Sbjct 817698 ACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATG 817639
Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087
|| | | ||||| ||||| || | || ||||| || || ||||| ||
Sbjct 817638 TTGGGGATGTTCTGGATGGAGCCGTCTTCAGCAATGATTCTGTTTTTCAT 817589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671135055715440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |