Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 3e-11 >seq4 Length=2550084 Score = 84.2 bits (92), Expect = 3e-11 Identities = 193/290 (67%), Gaps = 3/290 (1%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 ||||| |||||||| | | ||||| | ||||| || ||||||||||| || || ||| Sbjct 817878 GTAAATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGA 817819 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || || |||| ||| || ||||| || || | ||| | | || || ||| Sbjct 817818 CCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCTTTCATG 817759 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || || | |||||| ||| || |||||||| || | ||| |||||||| | | | Sbjct 817758 TGGATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACG 817699 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 | | || | ||| ||||| | || || || | ||||| ||| | || | | Sbjct 817698 ACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATG 817639 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 || | | ||||| ||||| || | || ||||| || || ||||| || Sbjct 817638 TTGGGGATGTTCTGGATGGAGCCGTCTTCAGCAATGATTCTGTTTTTCAT 817589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135055715440