Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 154 2e-32
seq12 107 3e-18
>seq4
Length=2550084
Score = 154 bits (170), Expect = 2e-32
Identities = 303/442 (69%), Gaps = 16/442 (4%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || ||| | ||| ||||| | || ||||||||||| ||
Sbjct 816485 CAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGCCGAT 816544
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| | ||||| ||| || ||||||| |||||| | ||
Sbjct 816545 GTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCCCGTGAT 816604
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
||||| || || ||| | || ||| ||||||||||||| ||| || ||||||
Sbjct 816605 TTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAACGGTG-- 816662
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || ||||||||| | || || || || ||||||||| ||||| |||
Sbjct 816663 -ACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGCGAGGAG 816721
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172
||||||||| ||| | || | ||| ||||| || | | | || | ||| |
Sbjct 816722 TTTGAGGCCTTGTATGAGAAGTATG----AGAAGGCCGGTAAGGGTCGCAAGACCATGAA 816777
Query 97173 ---CGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACA 97227
| |||| || ||| | || | || ||| |||||| |||||||| | || | ||
Sbjct 816778 GGCCCAGAAGCTCTGGTACGCTATTCTTGA-AGCTCAGACTGAGACTGGTAACCCCTTCA 816836
Query 97228 TTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGG 97287
| || ||||||||| | || ||||| |||||||| || | ||||| ||
Sbjct 816837 TGCTTTACAAGGATCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACTATTCGCA 816896
Query 97288 GCTCCAATCTGTGCACGGAAAT 97309
||||||| |||||||| |||||
Sbjct 816897 GCTCCAACCTGTGCACTGAAAT 816918
>seq12
Length=1358207
Score = 107 bits (118), Expect = 3e-18
Identities = 327/497 (66%), Gaps = 25/497 (5%)
Strand=Plus/Plus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| |||||| | |||| | ||||||||| ||| | |||| | | ||| | |
Sbjct 114097 AAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGTCCACCTTCGCTCAACGC 114156
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || || || || ||||||||||||||||| ||| |||||| |||||||
Sbjct 114157 CTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTTTGCTTCCATCTTC 114216
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||||||||||||||| |||||||| || |||| | ||||| | || || ||
Sbjct 114217 TGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAAACGAACTGATCTCCCGT 114276
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606
|| |||||||| ||| ||||| || | ||| | | ||| || | | ||
Sbjct 114277 GATGAGGGCCTGCACACCGACTTCGC---TTGCCTG---CTCCACTCTCACCTT---AAG 114327
Query 125607 TGCAGATCCAGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAAC 125664
|| | ||||| | || | | ||| | || | |||||||| || | || ||
Sbjct 114328 GGCCGTGCCAGCAAGCAAGTGAT--TCAGGATATCATCACCGATGCTGTCACTATCGAGA 114385
Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGA-TTGGCATGAACTGCAAGCTAATG 125723
| || ||||| || ||| | || || | || | | | |||||||||| | | || |||
Sbjct 114386 AGGAATTTCTCACTGAAGCGCTTCC-CTGTGCTTTACTCGGCATGAACTCCGATCTCATG 114444
Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC---CGCA 125778
| || || ||||| || || |||||||| || |||| | ||| |
Sbjct 114445 AAGCAATATATTGAGTTCGTAGCCGATCGTCTTCT-----TGTTGCCCTCGGCAATGAGA 114499
Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838
|| | ||||| | | ||| ||||| || || ||| | ||| || || | || ||||
Sbjct 114500 AGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCGGTGGCAAGA 114559
Query 125839 CCAACTTTTTCGAGAAG 125855
||||||| |||||||||
Sbjct 114560 CCAACTTCTTCGAGAAG 114576
Score = 105 bits (116), Expect = 1e-17
Identities = 199/290 (69%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||| ||||||| || ||||| | || || | |||||
Sbjct 113698 ATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTGCTGAGGAAATTGATCTT 113757
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || | || ||| | | || ||| || | |||| ||| | ||
Sbjct 113758 TCCAAGGATTTGCATGACTGGAACAACCGCCTGAATGCAGACGAGCAGTTCTTTGTTTCC 113817
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|||||| | || |||||||||| || ||||| ||||||||||| || ||| | |||
Sbjct 113818 CACATTCTTGCTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGA 113877
Query 125199 TT---CTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
|| | || | |||| | || || |||| || || || || ||||| ||||||
Sbjct 113878 TTTAGCGCTGA--AGTTCA-GATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATG 113934
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|| |||||| | ||||| || | |||||| || || |||| |||||
Sbjct 113935 ATGGAGAACATCCACTCTGAGACCTACTCTCTGCTCATCGACACATACAT 113984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741054623959440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |