Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 >seq5 Length=2272025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || || || || ||||||||||| || |||||||| || || | || || ||||||| Sbjct 1174670 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCGTCCTC 1174728 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| | | || | |||||||| ||| || | | ||||||||| Sbjct 1174729 GAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 1174788 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||||| | | ||||| |||| ||||||| ||| | || || || || Sbjct 1174789 GATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 1174848 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 || ||||| || || || || ||||||||| || || Sbjct 1174849 CCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCCT 1174885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248663804494