Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12 161 2e-35 >seq12 Length=1358207 Score = 161 bits (178), Expect = 2e-35 Identities = 198/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || ||||| || || ||||||||||| ||||| Sbjct 413110 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 413052 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| | || | || |||| || |||| Sbjct 413051 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCCGCCATGATCTACGAGGAGAC 412992 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || || | ||| || || ||| ||||| Sbjct 412991 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATTCGTGACGCCGTCACCTACACCGA 412932 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || || || | || | ||||| || | || || || || Sbjct 412931 GCACGCCAAGCGCAAGACCGTGACTTCGCTCGACGTTGTCTACGCCCTTAAGCGCCAGGG 412872 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 412871 CCGCACCCTCTACGGTTTCGGTGGTTAA 412844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074748332342