Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq12 161 2e-35
>seq12
Length=1358207
Score = 161 bits (178), Expect = 2e-35
Identities = 198/268 (74%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 413110 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 413052
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| ||||||||| | || | || |||| || ||||
Sbjct 413051 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCCGCCATGATCTACGAGGAGAC 412992
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || || | ||| || || ||| |||||
Sbjct 412991 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATTCGTGACGCCGTCACCTACACCGA 412932
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| || || || | || | ||||| || | || || || ||
Sbjct 412931 GCACGCCAAGCGCAAGACCGTGACTTCGCTCGACGTTGTCTACGCCCTTAAGCGCCAGGG 412872
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| || |||||
Sbjct 412871 CCGCACCCTCTACGGTTTCGGTGGTTAA 412844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074748332342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |