Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 4e-28
seq12 107 2e-18
>seq4
Length=2550084
Score = 140 bits (154), Expect = 4e-28
Identities = 539/832 (65%), Gaps = 26/832 (3%)
Strand=Plus/Minus
Query 63014 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63073
|||||| ||||| ||||| || ||||||| ||| |||||| ||| | ||| || | |||
Sbjct 816850 ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCA 816791
Query 63074 GACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCT--CTTTCGTATAGTGT--A 63128
|| | || | ||||| || | ||| | |||| | | ||| ||| | |
Sbjct 816790 GA-GCTTCTGGGCCTTCATGGTC---TTGCGAC-CCTTACCGGCCTTCTCATACTTCTCA 816736
Query 63129 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 63188
||||| || ||||| || || | || | | | ||||| || |||| || |||
Sbjct 816735 TACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCAC 816676
Query 63189 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63248
|| | | ||| || |||| | || || || ||||| || |||||||| ||||| ||
Sbjct 816675 ATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGC 816616
Query 63249 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63308
|| | || | ||| | || || || || ||||| ||||| || ||||||
Sbjct 816615 GCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGG 816556
Query 63309 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63368
||| | | | ||| | ||||| || || | ||| ||||| | | | || || || |||
Sbjct 816555 AACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTG 816496
Query 63369 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63428
|| || ||||| || | ||| | ||| ||||| || | || | | ||| || | | |
Sbjct 816495 TTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACA 816436
Query 63429 CCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 63488
|| || || ||||||||||||||| || || || | || || || | |
Sbjct 816435 CCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGAT-TCGGTGGAC 816377
Query 63489 GAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCAT 63546
| | ||||| || || || ||||| || ||||| | || || ||| || | ||||| |
Sbjct 816376 GTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGT 816318
Query 63547 AGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63606
|||||||||| ||||| || || |||||| || | || || ||| | ||| |
Sbjct 816317 AGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCT 816258
Query 63607 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63666
|| || || || || || | ||| || || ||||| ||||| | || || | |
Sbjct 816257 GAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGA 816198
Query 63667 GATTGTACGTCTC----AATAGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGA 63720
| ||||| ||||| | ||| || ||| | |||| || || || | ||
Sbjct 816197 GGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCA------GATACCCACAGAGA 816144
Query 63721 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGG 63780
||||||| | ||||||||| |||| || || |||||| | || || | | ||| |
Sbjct 816143 CACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACG 816084
Query 63781 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63832
|| |||| ||| || || || || || | ||| ||||| || || ||
Sbjct 816083 ATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATA 816032
>seq12
Length=1358207
Score = 107 bits (118), Expect = 2e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| ||| |||||| ||||| || | || |||||||| || || || |
Sbjct 114305 CAAGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAA 114246
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| ||||| ||||| || ||||| || |||||||| || | ||| ||||||
Sbjct 114245 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAG 114186
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|| || ||||||||||||||||||| |||
Sbjct 114185 ATGCCCTCTACTGCAGCAAAGGCAACAAG 114157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943353301040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |