Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 338 2e-87 >seq4 Length=2550084 Score = 338 bits (374), Expect = 2e-87 Identities = 1064/1630 (65%), Gaps = 34/1630 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | || || | | ||| ||||| || | | | || ||| | ||||| Sbjct 816215 TTTACCCACGCCTCCCCCACCCTCTTCAACGCTGGTACCCCTCAGCCCCAGCTATCTTCA 816274 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | |||||||| || ||| |||||||||| ||||| || |||| Sbjct 816275 TGCTTCTTGGTTGACATGAAGGAGGACAGCATTGAGGGTATCTACGACACCCTCAAGACG 816334 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || || ||| | | || ||||| | || || Sbjct 816335 TGTGCCATGATCTCCAAGATGGCTGGTGGCATCGGTCTCAACG-TCCACCGAATCCGCGC 816393 Query 363726 A--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | | | || |||||| ||| || || ||| ||||| | ||||||||| Sbjct 816394 AACCGGTTCA--TACATTGCCGGTACCAATGGTACCTCCAATGGTGTCACCCCCATGCTT 816451 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| ||||||| ||||||||||| ||||| || || Sbjct 816452 CGTGTCTTCAACAACACTGCTCGGTACGTGGACCAGGGTGGCAACAAGCGACCCGGTGCT 816511 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || || || || || |||||| || |||||| | || ||||| || || ||||| || Sbjct 816512 TTCGCCATCTACCTTGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTCGACCTCCGCAAG 816571 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| ||||| || || | || || |||||| ||||| || || ||| | |||| Sbjct 816572 AACCACGGAAAGGAAGAGGTCCGAGCCCGTGATTTGTTCCTCGCGCTATGGATCCCTGAT 816631 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | ||||| | || | Sbjct 816632 CTGTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACTCTCATGTGCCCCAATGAGT 816689 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| ||||| | || || || | || || | || || |||||||| Sbjct 816690 GCCCTGGCCTTGCCGATTGCTACGGCGAGGAGTTTGAGGCCTTGTATGAGAAGTATGAGA 816749 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 || || |||| ||| ||||| || || |||||||| |||| || || | || Sbjct 816750 AGGCCGGTAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTACGCTATTCTTGAAG 816809 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTG-CAACCGCAAGTCC 364200 | |||| |||||| || | |||| ||| | ||||| || || || |||||||||| | Sbjct 816810 CTCAGACTGAGACTGGTAACCCCTTCATGCTTTACAAGGA-TCATGCCAACCGCAAGAGC 816868 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| || || |||| |||| |||||| || || || || || ||||| Sbjct 816869 AACCAGAAGAACCTCGGCACTATTC-GCAGCTCCAACCTGTGCACTGAAATCATCGAATA 816927 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || ||| || || || |||||| || |||||||| ||| | || || || | || || Sbjct 816928 CAGCGCCCCTGATGAAGTTGCCGTCTGCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGT 816987 Query 364320 ------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || | | | || |||| ||| | | | || || ||| | || Sbjct 816988 TGACTACAACAACGATTGTTATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGT 817047 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428 |||| || ||||| | || || || |||| || ||||||| || || || Sbjct 817048 CCGCAACCTGAACAAGATCATTGATGTCAACCATTACCCTGTTCCTGAGGCTCGCAACAG 817107 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 | || ||||| || || || || ||| | ||||| ||||| || ||||| | || Sbjct 817108 C-----AACATGCGCCACCGTCCCATCGGTGTCGGTGTCCAGGGTCTTGCTGATGCCTTC 817162 Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 | ||| ||| | ||||| || ||||| ||||||| || || || | |||||| Sbjct 817163 CTTGCCCTCCGCATGCCTTTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTT 817222 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGC-TTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || ||| || || ||||||| | |||| ||| ||| | |||| Sbjct 817223 GAGACTATCTATCACGCTGCTTTGACTGCGTCCGTGCAGCTTGCCAAGGA-GGAGGGTCC 817281 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 ||||| || | |||| || ||| || | || | | ||||| || | ||||| Sbjct 817282 CTACTCCACCTTCAAGGGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGTGGAA 817341 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727 || | || || | | ||| ||||||| |||| || | || ||| |||| || Sbjct 817342 CGTGAAACCTTCCGAGCTCTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGG 817401 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 || |||||| || | || |||||||| || ||| ||| | |||||||| || Sbjct 817402 TATCCGCAACAGTCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGG 817461 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||||||||||||||| || | ||| ||| | || || || || || ||| |||| Sbjct 817462 TAACAACGAGTGCTTCGAGCCTTACACATCCAACATCTACTCTCGTCGTGTCCTTGCCGG 817521 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| || || | || |||||||||| ||| || || ||| Sbjct 817522 CGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGATCTCGTTGACATGGGCCTATGGTC 817581 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 || ||||| ||| ||||| || | | || || | |||||||| || | Sbjct 817582 GGATGCTATGAAAAACAGAATCATTGCTGAAGACGGCTCCATCCAGAACATCCCCAACAT 817641 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 || | ||| | ||| || | ||||| ||||| ||||| |||||| ||| || | Sbjct 817642 CCCCGCGGATGTTAAGGCTCTCTACAAGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGT 817701 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGC-CAGTCGTTTAACGTATTCA 365086 | ||||| ||||| || || || || || || | | | ||||| | ||| | || Sbjct 817702 CCAGATGGCTGCCGACCGAGGCGCCTTCAT-TGACCAATCTCAGTCCCTCAACATCCACA 817760 Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146 ||| | || ||| | |||| |||| |||||| ||| ||| ||||| |||| Sbjct 817761 TGAAAGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGCTGGAAGCTTGGTC 817820 Query 365147 TTAAGACAGG 365156 | ||||| || Sbjct 817821 TCAAGACCGG 817830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345350586308