Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4 338 2e-87
>seq4
Length=2550084
Score = 338 bits (374), Expect = 2e-87
Identities = 1064/1630 (65%), Gaps = 34/1630 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | || || | | ||| ||||| || | | | || ||| | |||||
Sbjct 816215 TTTACCCACGCCTCCCCCACCCTCTTCAACGCTGGTACCCCTCAGCCCCAGCTATCTTCA 816274
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | |||||||| || ||| |||||||||| ||||| || ||||
Sbjct 816275 TGCTTCTTGGTTGACATGAAGGAGGACAGCATTGAGGGTATCTACGACACCCTCAAGACG 816334
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || || || || ||| | | || ||||| | || ||
Sbjct 816335 TGTGCCATGATCTCCAAGATGGCTGGTGGCATCGGTCTCAACG-TCCACCGAATCCGCGC 816393
Query 363726 A--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
| | | || |||||| ||| || || ||| ||||| | |||||||||
Sbjct 816394 AACCGGTTCA--TACATTGCCGGTACCAATGGTACCTCCAATGGTGTCACCCCCATGCTT 816451
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| ||||||| ||||||||||| ||||| || ||
Sbjct 816452 CGTGTCTTCAACAACACTGCTCGGTACGTGGACCAGGGTGGCAACAAGCGACCCGGTGCT 816511
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
|| || || || || |||||| || |||||| | || ||||| || || ||||| ||
Sbjct 816512 TTCGCCATCTACCTTGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTCGACCTCCGCAAG 816571
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| ||||| || || | || || |||||| ||||| || || ||| | ||||
Sbjct 816572 AACCACGGAAAGGAAGAGGTCCGAGCCCGTGATTTGTTCCTCGCGCTATGGATCCCTGAT 816631
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| || ||| | | | | | ||| | ||| | ||||| | || |
Sbjct 816632 CTGTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACTCTCATGTGCCCCAATGAGT 816689
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || ||| ||||| | || || || | || || | || || ||||||||
Sbjct 816690 GCCCTGGCCTTGCCGATTGCTACGGCGAGGAGTTTGAGGCCTTGTATGAGAAGTATGAGA 816749
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
|| || |||| ||| ||||| || || |||||||| |||| || || | ||
Sbjct 816750 AGGCCGGTAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTACGCTATTCTTGAAG 816809
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTG-CAACCGCAAGTCC 364200
| |||| |||||| || | |||| ||| | ||||| || || || |||||||||| |
Sbjct 816810 CTCAGACTGAGACTGGTAACCCCTTCATGCTTTACAAGGA-TCATGCCAACCGCAAGAGC 816868
Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATA 364259
|||||| || |||| || || |||| |||| |||||| || || || || || |||||
Sbjct 816869 AACCAGAAGAACCTCGGCACTATTC-GCAGCTCCAACCTGTGCACTGAAATCATCGAATA 816927
Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
|| ||| || || || |||||| || |||||||| ||| | || || || | || ||
Sbjct 816928 CAGCGCCCCTGATGAAGTTGCCGTCTGCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGT 816987
Query 364320 ------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373
|| | | | || |||| ||| | | | || || ||| | ||
Sbjct 816988 TGACTACAACAACGATTGTTATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGT 817047
Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428
|||| || ||||| | || || || |||| || ||||||| || || ||
Sbjct 817048 CCGCAACCTGAACAAGATCATTGATGTCAACCATTACCCTGTTCCTGAGGCTCGCAACAG 817107
Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488
| || ||||| || || || || ||| | ||||| ||||| || ||||| | ||
Sbjct 817108 C-----AACATGCGCCACCGTCCCATCGGTGTCGGTGTCCAGGGTCTTGCTGATGCCTTC 817162
Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548
| ||| ||| | ||||| || ||||| ||||||| || || || | ||||||
Sbjct 817163 CTTGCCCTCCGCATGCCTTTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTT 817222
Query 364549 GAAACAATGTATTTTGCCGCAATGACTGC-TTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607
|| || || ||| || || ||||||| | |||| ||| ||| | ||||
Sbjct 817223 GAGACTATCTATCACGCTGCTTTGACTGCGTCCGTGCAGCTTGCCAAGGA-GGAGGGTCC 817281
Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667
||||| || | |||| || ||| || | || | | ||||| || | |||||
Sbjct 817282 CTACTCCACCTTCAAGGGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGTGGAA 817341
Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727
|| | || || | | ||| ||||||| |||| || | || ||| |||| ||
Sbjct 817342 CGTGAAACCTTCCGAGCTCTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGG 817401
Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787
|| |||||| || | || |||||||| || ||| ||| | |||||||| ||
Sbjct 817402 TATCCGCAACAGTCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGG 817461
Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847
||||||||||||||||| || | ||| ||| | || || || || || ||| ||||
Sbjct 817462 TAACAACGAGTGCTTCGAGCCTTACACATCCAACATCTACTCTCGTCGTGTCCTTGCCGG 817521
Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907
|| || | ||| || || | || |||||||||| ||| || || |||
Sbjct 817522 CGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGATCTCGTTGACATGGGCCTATGGTC 817581
Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967
|| ||||| ||| ||||| || | | || || | |||||||| || |
Sbjct 817582 GGATGCTATGAAAAACAGAATCATTGCTGAAGACGGCTCCATCCAGAACATCCCCAACAT 817641
Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027
|| | ||| | ||| || | ||||| ||||| ||||| |||||| ||| || |
Sbjct 817642 CCCCGCGGATGTTAAGGCTCTCTACAAGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGT 817701
Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGC-CAGTCGTTTAACGTATTCA 365086
| ||||| ||||| || || || || || || | | | ||||| | ||| | ||
Sbjct 817702 CCAGATGGCTGCCGACCGAGGCGCCTTCAT-TGACCAATCTCAGTCCCTCAACATCCACA 817760
Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146
||| | || ||| | |||| |||| |||||| ||| ||| ||||| ||||
Sbjct 817761 TGAAAGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGCTGGAAGCTTGGTC 817820
Query 365147 TTAAGACAGG 365156
| ||||| ||
Sbjct 817821 TCAAGACCGG 817830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303345350586308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |