Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 141 1e-28
>seq4
Length=2550084
Score = 141 bits (156), Expect = 1e-28
Identities = 538/831 (65%), Gaps = 24/831 (3%)
Strand=Plus/Minus
Query 62869 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 62928
|||||| ||||| ||||| || ||||||| ||| |||||| ||| | ||| || | |||
Sbjct 816850 ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCA 816791
Query 62929 GACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCT-CTTTCGTATAGTGT--AT 62984
|| | || | ||||| || | ||| | ||| | | ||| ||| | ||
Sbjct 816790 GA-GCTTCTGGGCCTTCATGGTC---TTGCGACCCTTACCGGCCTTCTCATACTTCTCAT 816735
Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACA 63044
|||| || ||||| || || | || | | || ||||| || |||| || ||||
Sbjct 816734 ACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACA 816675
Query 63045 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63104
| | | ||| || |||| | || || || ||||| || |||||||| ||||| || |
Sbjct 816674 TGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCG 816615
Query 63105 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63164
| | || | ||| | || || || || ||||| ||||| || |||||||
Sbjct 816614 CGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGA 816555
Query 63165 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63224
|| | | | ||| | ||||| || || | ||| ||||| | | | || || || ||||
Sbjct 816554 ACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGT 816495
Query 63225 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63284
| || ||||| || | ||| | ||| ||||| || | || | | ||| || | | ||
Sbjct 816494 TGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACAC 816435
Query 63285 CATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63344
||||||| ||||||||||| || | || || || | || || || | | |
Sbjct 816434 CATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGAT-TCGGTGGACG 816376
Query 63345 AT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATA 63402
| ||||| || || || ||||| || ||||| | || || ||| || | || || ||
Sbjct 816375 TTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGTA 816317
Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462
||| ||||| || || || ||| |||||| || | || || ||| | ||| | |
Sbjct 816316 GATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTG 816257
Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522
| || || || || || | ||| || || ||||| ||||| | || || | ||
Sbjct 816256 AGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAG 816197
Query 63523 ATTGTACGTCTC----AATAGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGAC 63576
||||| ||||| | ||| || ||| | |||| || || || | |||
Sbjct 816196 GTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCA------GATACCCACAGAGAC 816143
Query 63577 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63636
|||||| | ||||||||| |||| || || |||||| | || || | | ||| ||
Sbjct 816142 ACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTACGA 816083
Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687
| |||| ||| || || || || || | ||| ||||| || || ||
Sbjct 816082 TCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATA 816032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633628087322400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |