Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
seq461 87.8 2e-12
>seq2
Length=4202288
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| |||| || || | || | || ||||| || ||||||||||| |||
Sbjct 1893444 ATACCACCACGAAGTCGCAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCG 1893503
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || || || || || || || ||| | || |||||||| ||||||||
Sbjct 1893504 GACAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGG 1893563
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | || | |||||||| ||| ||
Sbjct 1893564 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCA 1893623
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | || | || ||||| || || || || ||
Sbjct 1893624 ACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 1893661
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| || | | || | || | || ||||| || ||||||||||| |||||
Sbjct 1893218 ACCGCCACGGAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCT 1893277
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || || || || || || |||||||| |||| |||||||| |||||||| ||
Sbjct 1893278 CAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 1893337
Query 114275 AATGCCTTCTTTGTCGGCAATCTT 114298
|| || || ||||| ||||||
Sbjct 1893338 GATACCCTCCTTGTCCTGAATCTT 1893361
>seq461
Length=561
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| || || || || ||||||||||| || ||| || |||||||||||||| ||
Sbjct 555 CGTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCGTCTTCAAGTTGTTTTCC 496
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| |||| | | ||| ||||| || || || || || ||||| ||||| ||
Sbjct 495 GGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTT 436
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | |||| |||||||| | || || |||| || | ||| || || |||| ||
Sbjct 435 CACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATGT 376
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 375 CTTCACGAAAATCTGCAT 358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131870528328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |