Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 288 2e-72 seq12 176 9e-39 >seq4 Length=2550084 Score = 288 bits (318), Expect = 2e-72 Identities = 1101/1711 (64%), Gaps = 67/1711 (4%) Strand=Plus/Minus Query 243743 AACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCA 243802 || || | |||||| | ||||||| ||| | ||||||||||||||||||||||| ||| Sbjct 817875 AATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGACCA 817816 Query 243803 CTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCC 243862 |||| || || ||||||| || | ||| ||| || ||||| | | Sbjct 817815 AGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTG------GGGTCTTTC 817762 Query 243863 TCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGC 243921 | || |||||||||||| ||||| | ||||| |||| || || || || Sbjct 817761 ATGTG------GATGTTGAGGGACTGAGATTGGTCAATGAAGG-CGCCTCGGTCGGCAGC 817709 Query 243922 CATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTG 243981 ||| || || | ||| || ||||| || | |||||||||| | ||| | | Sbjct 817708 CATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATC 817649 Query 243982 CTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCAT 244041 | |||||| ||||||||| | ||||| | | | |||| | | ||| Sbjct 817648 CGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGTCTTCAGCAATGATTCTGTTTTTCAT 817589 Query 244042 GTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACCAC 244098 ||| ||| ||||||| | | || ||| || || ||| | || || || Sbjct 817588 AGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGA---GGAGCCAGGGGTTGACAAC 817532 Query 244099 CTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCT 244158 ||| ||||| || | || || || || ||||| |||| || ||||||| || Sbjct 817531 CTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGCA 817472 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| |||| ||||| ||||| | || || ||||| |||||||| | || |||||||| Sbjct 817471 CTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACT 817412 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGA 244278 ||| | | |||||| || || | || |||| | ||||||||| | || || Sbjct 817411 GTTGCGGATACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCAGTCCCAGA-GCTCGG 817353 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCT 244338 |||| || |||| ||||||||| ||||| || | || | | | || Sbjct 817352 AAGGTT-TCACGTT-------CCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGA 817301 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGG 244397 ||||| | |||| | ||||||||| || || ||| |||| | | | ||| | | Sbjct 817300 GCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCTGCACGGACGCAGTCAAAG- 817242 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA 244457 | |||| ||||| ||||| ||||| ||||||| || || |||| | | | Sbjct 817241 CAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAA 817182 Query 244458 AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTC 244517 | || |||| | | |||| | || || || ||||| || |||| |||||||| | Sbjct 817181 AAGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGAC 817122 Query 244518 TGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCT 244577 ||| ||| ||||| | || || || || |||||| |||| | || || | || Sbjct 817121 GGTGGCGCATGTTGCTGTTGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAATGATCT 817062 Query 244578 TGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC---T 244634 |||| ||||||||| || | || || ||| || | || ||||| || | Sbjct 817061 TGTTCAGGTTGCGGACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAACAAT 817002 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 ||| | | || ||| | || | ||||| | ||| |||| Sbjct 817001 CGTTGTTGTAGTCAACGAATG-----------AAGGC----AGGGCCAGCGAGGCAAGGT 816957 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 |||||||||| || || || | | | |||| | || || || ||||| ||||| || Sbjct 816956 TGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCACAGGTTGGAGC 816897 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG-CAGGCGTCCTTGTAGAGC 244813 || ||||| |||| || || ||| |||| |||| || | |||||||| ||| Sbjct 816896 TGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGA-TCCTTGTAAAGC 816838 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873 |||||||| || ||||| ||| || | || | || |||||| | | ||| Sbjct 816837 ATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGCTTCTGGGCC 816778 Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 || | ||| ||||| |||| || | ||| || |||| |||||| ||||| Sbjct 816777 TTCATGGTCTTGCGACCCTTACCGGCCTTCTCATACTTCTCATACAAGGCCTCAAACTCC 816718 Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993 ||| || ||| | ||||| |||||| |||||||||||| |||| || ||| Sbjct 816717 TCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCG 816658 Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053 | || ||| | || |||||| || || |||||||| || || |||| | || | | Sbjct 816657 TTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGG 816598 Query 245054 GTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | ||| | ||| ||| || |||||| | || || | || || ||||| ||| Sbjct 816597 G--CTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGG 816540 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| |||| || ||||| ||||||||||| |||||||||| Sbjct 816539 CGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCA 816480 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | || | || | |||||||| || || | || | || || ||| || Sbjct 816479 CGTACCGAGC-AGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCA 816421 Query 245231 TTGGTGCCCTTGATGTAGGCGCC-CTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTA 245285 ||||| || ||||| | || |||| | || | | | ||||| | || | Sbjct 816420 TTGGTACCGGCAATGTATGAACCGGTTGC----GCGGATTC-GGTGGACGTTGAGACCGA 816366 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || || ||||||||| | ||| || |||||| |||||| || ||||| | Sbjct 816365 TGCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGGGTGTCGTAGATACCCTCAA 816306 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||||||| |||||||| | || ||||| || || |||||||||| ||| | | | Sbjct 816305 TGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACCAG 816246 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 |||||| || |||||| |||||||||||| Sbjct 816245 CGTTGAAGAGGGTGGGGGAGGCGTGGGTAAA 816215 >seq12 Length=1358207 Score = 176 bits (194), Expect = 9e-39 Identities = 315/446 (71%), Gaps = 13/446 (3%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || |||||| | || || ||||||||||||||| || || || || ||||||||| Sbjct 114157 CTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTTTGCTTCCATCTTC 114216 Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| || || || ||||| || | |||||||| |||||||| ||| | | Sbjct 114217 TGGCTCAAGAAGCGCGGCCTC-ATGCCTGGTTTGACCTTCTCAAACGAACTGATCTCCCG 114275 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACC-TCAGGCACA 42882 || ||||| ||||| | ||||| || ||||| || ||| |||| | ||| | Sbjct 114276 TGATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCACTC---TCACCTTAAGGGCCG 114332 Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942 ||| | ||| | | | | || |||||||| || || || ||||||||||| | Sbjct 114333 TGCCAGC-AAGCAAGTGATTCAGGATATCATCACCGATGCTGTCACTATCGAGAAGGAAT 114391 Query 42943 TCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAA 43000 | ||||| | |||| ||| ||| | | ||||||||||| ||| |||||| |||| Sbjct 114392 TTCTCACTGAAGCGCTTCCCTGTG-CTTTACTCGGCATGAACTCCGATCTCATGAAGCAA 114450 Query 43001 GTACATCCAGTACGTCGCCGACCATC-TCCTGTGCCAGATGGGTCTCAGCCGCCTCTACA 43059 || || ||| ||| ||||| | || || ||| | || | || | | |||| Sbjct 114451 -TATATTGAGTTCGTAGCCGATCGTCTTCTTGTTGCCCTCGGCAATGAGAAG-GTGTACA 114508 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | | || |||||||||||||||||| ||||| || | | |||||||||||||| | Sbjct 114509 AGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCGGTGGCAAGACCAACTTCT 114568 Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| |||| ||||| ||| Sbjct 114569 TCGAGAAGCGTGTCGGTGACTATCAG 114594 Score = 89.7 bits (98), Expect = 1e-12 Identities = 223/336 (66%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||| || ||| |||||| || ||||| ||||| || Sbjct 113698 ATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTGCTGAGGAAATTGATCTT 113757 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA----ACGAAAAGTTTTTCCTCAA 42415 ||||||| | | |||| | || | |||| |||| |||| || | Sbjct 113758 TCCAAGGATTTGCATGACTGGAACA-ACCGCCTGAATGCAGACGAGCAGTTCTTTGTTTC 113816 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || ||||| ||||| || || ||||| ||||| |||||||||| | | Sbjct 113817 CCACATTCTTGCTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCG 113876 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 || | || || ||| | ||||| || || ||||| ||||||||||| || Sbjct 113877 ATTTAGCGCTGAAGTTCAGATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATGAT 113936 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||||||| ||| | ||||||| |||| |||||| ||| || Sbjct 113937 GGAGAACATCCACTCTGAGACCTACTC---TCTGCTCATCGACACATACATCAAGGAGCC 113993 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 | |||| | | |||||||| ||||| || || Sbjct 113994 TTCCCAGCGCACCTATCTGTTCAATGCCATTGAAAC 114029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333368705440