Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4 187 3e-42
seq12 102 1e-16
>seq4
Length=2550084
Score = 187 bits (206), Expect = 3e-42
Identities = 1131/1787 (63%), Gaps = 67/1787 (4%)
Strand=Plus/Minus
Query 113567 AACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCC 113626
|| ||||||||| || ||||| | |||||||||||||| || |||||||| ||
Sbjct 817875 AATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGACCA 817816
Query 113627 TGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAG 113686
|||||||| | | ||||| || | |||| | || || || |||| |
Sbjct 817815 AGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCTTTCATGTGG 817756
Query 113687 AGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACA 113746
| ||| | || ||||| || |||||| || || || || ||||| | | ||
Sbjct 817755 ATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGAC- 817697
Query 113747 TCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803
|| || | || |||||||| || ||||||| ||||| ||| | |||||
Sbjct 817696 --CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATG 817639
Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA-TGAGA---TCCTTCATATCCTT 113859
| ||| || ||||||||||| | ||| | || ||| | |||||| | |
Sbjct 817638 TTGGGGATGTTCTGGATGGAGCC----GTCTTCAGCAATGATTCTGTTTTTCATAGCATC 817583
Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 113919
||||| || || || | |||||||| | ||| |||||||| |||||
Sbjct 817582 CGACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTC 817523
Query 113920 ACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 113978
|| || ||| || | ||| ||||| |||| ||||| ||||| |||||||| ||||
Sbjct 817522 GCCGGCAAGGACACGACG-AGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGT 817464
Query 113979 TACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038
|||||| ||| || | || || || ||||||||||||| ||| || ||||| ||||
Sbjct 817463 TACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGA 817404
Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT---TTGTCT 114095
||| | ||| | | | || ||| | |||||||| | ||||| | |
Sbjct 817403 TACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCAGTCCCA---GAGCTCGGAAGGTT 817347
Query 114096 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCT 114155
| | | |||||| || ||||| |||||||||| ||||| || || |||| || ||
Sbjct 817346 TCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGG 817287
Query 114156 CGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACA 114212
||| || ||||| ||| || | | |||| ||| | || |||||||| |
Sbjct 817286 AGTAGGGACCCTCCTCCTTGGCAAGCTGCACGGA---CGCAGTCAAAGCAGCGTGATAGA 817230
Query 114213 TTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 114272
| |||||||| || | |||| | ||||| ||| ||||| | | |||
Sbjct 817229 TAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCGGA 817170
Query 114273 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 114332
|| || |||| || ||||| |||||||||| || || || || || | ||| |
Sbjct 817169 GGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCATGT 817110
Query 114333 TAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 114389
| || ||||| ||| || || ||| || ||| || | | | || || |
Sbjct 817109 TGCTGTTGCGAGC---CTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGT 817053
Query 114390 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 114449
| | |||| || || | || || | ||||| | | ||| ||| | | |
Sbjct 817052 TGCGGACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGT 816993
Query 114450 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509
| || | ||| ||||| | || || || || || || | |||||
Sbjct 816992 AGTCAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGG 816933
Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569
| |||| || || ||||| || |||| || || || ||| ||||| | |||||| |
Sbjct 816932 CGCTGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCT 816873
Query 114570 GATTTGACTTTGTGTT-ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628
| || ||| ||| || | |||||||||||||||| | || | || ||||| ||
Sbjct 816872 GGTTGCTCTTGCGGTTGGCATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTC 816814
Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687
|| | | |||||||| | ||||| | || | ||| || ||| ||| || ||
Sbjct 816813 TGAGCTTCAAGAATAGCGTACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG---CGACC 816761
Query 114688 CT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 114741
|| ||| ||| ||||| || | ||| |||||||| || || | || |
Sbjct 816760 CTTACCGGCCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGC 816701
Query 114742 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTT 114801
|| || || || || ||||| | ||||| ||| | ||| || ||| ||||||||
Sbjct 816700 AAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTT 816641
Query 114802 CATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 114861
|||||| || || |||||||| || || ||| | ||| || || | ||||| |
Sbjct 816640 CATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTT 816581
Query 114862 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921
|| || || || | || | || || | || ||| |||||||| || || |||||
Sbjct 816580 TCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTA 816521
Query 114922 CACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGC 114975
| |||| | || | ||| | | ||| |||||| || |||| || |||
Sbjct 816520 GATGGCGAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCCACGTACCGAGCAGTGTT 816464
Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TA 115033
|| || || |||||||| || ||| ||||| || ||||| || || || ||
Sbjct 816463 GTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTA 816404
Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093
|| || || || | || |||| || | ||| || || || ||| ||| |||
Sbjct 816403 TGA-ACCGGTT-GCGCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAG 816346
Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153
|| || ||| | |||| || ||||||| || || || ||| |||| | |
Sbjct 816345 ATCATGGCACACGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCA 816286
Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213
| | |||||| || | || ||| || |||||||||||||||||||| || |
Sbjct 816285 ACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAG 816226
Query 115214 GCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC-GGCGGGAATGT 115271
|||||| | || | || | |||||| | ||||||||| | ||| || | ||||
Sbjct 816225 GCGTGGGT-AAAAAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCG-ATGT 816168
Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318
| || || ||||| | ||||| ||||| | ||||| || |||
Sbjct 816167 CATCACCCCAGATACCCACAGAGACACGCATGATCATGTGCTGTGGT 816121
>seq12
Length=1358207
Score = 102 bits (112), Expect = 1e-16
Identities = 165/231 (71%), Gaps = 10/231 (4%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| || ||||| ||||||||||| ||||| || |||||| || || |||||||| ||
Sbjct 114291 GTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAACCAGGCATGAGGCC 114232
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||| | |||||| || | | ||| | ||| ||||||||| ||||| ||
Sbjct 114231 GCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAGATGCCCTCTACTGC 114172
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCA-AACCACTTCAT 126234
|| || |||| || || | ||| |||| | |||| |||| | | | |||| ||
Sbjct 114171 AGCAAAGGCAACAAGGCGTTGAGCGAAGGTG---GACTGCTTGTCTGAGATCCACCGCAA 114115
Query 126235 CGCCCACTGCGCCTT-TTTCTCGATACACGGGAC--GGTCTGGATCGCTTC 126282
||||||| ||||| ||||| ||| || || || | |||| | |||||
Sbjct 114114 TGCCCACTCAGCCTTCTTTCT-GATGCAAGGAACTGGACCTGGTTAGCTTC 114065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349911341520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |