Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 187 3e-42 seq12 102 1e-16 >seq4 Length=2550084 Score = 187 bits (206), Expect = 3e-42 Identities = 1131/1787 (63%), Gaps = 67/1787 (4%) Strand=Plus/Minus Query 113567 AACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCC 113626 || ||||||||| || ||||| | |||||||||||||| || |||||||| || Sbjct 817875 AATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGACCA 817816 Query 113627 TGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAG 113686 |||||||| | | ||||| || | |||| | || || || |||| | Sbjct 817815 AGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCTTTCATGTGG 817756 Query 113687 AGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACA 113746 | ||| | || ||||| || |||||| || || || || ||||| | | || Sbjct 817755 ATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGAC- 817697 Query 113747 TCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || || | || |||||||| || ||||||| ||||| ||| | ||||| Sbjct 817696 --CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATG 817639 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA-TGAGA---TCCTTCATATCCTT 113859 | ||| || ||||||||||| | ||| | || ||| | |||||| | | Sbjct 817638 TTGGGGATGTTCTGGATGGAGCC----GTCTTCAGCAATGATTCTGTTTTTCATAGCATC 817583 Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 113919 ||||| || || || | |||||||| | ||| |||||||| ||||| Sbjct 817582 CGACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTC 817523 Query 113920 ACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 113978 || || ||| || | ||| ||||| |||| ||||| ||||| |||||||| |||| Sbjct 817522 GCCGGCAAGGACACGACG-AGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGT 817464 Query 113979 TACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038 |||||| ||| || | || || || ||||||||||||| ||| || ||||| |||| Sbjct 817463 TACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGA 817404 Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT---TTGTCT 114095 ||| | ||| | | | || ||| | |||||||| | ||||| | | Sbjct 817403 TACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCAGTCCCA---GAGCTCGGAAGGTT 817347 Query 114096 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCT 114155 | | | |||||| || ||||| |||||||||| ||||| || || |||| || || Sbjct 817346 TCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGG 817287 Query 114156 CGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACA 114212 ||| || ||||| ||| || | | |||| ||| | || |||||||| | Sbjct 817286 AGTAGGGACCCTCCTCCTTGGCAAGCTGCACGGA---CGCAGTCAAAGCAGCGTGATAGA 817230 Query 114213 TTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 114272 | |||||||| || | |||| | ||||| ||| ||||| | | ||| Sbjct 817229 TAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCGGA 817170 Query 114273 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 114332 || || |||| || ||||| |||||||||| || || || || || | ||| | Sbjct 817169 GGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCATGT 817110 Query 114333 TAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 114389 | || ||||| ||| || || ||| || ||| || | | | || || | Sbjct 817109 TGCTGTTGCGAGC---CTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGT 817053 Query 114390 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 114449 | | |||| || || | || || | ||||| | | ||| ||| | | | Sbjct 817052 TGCGGACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGT 816993 Query 114450 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509 | || | ||| ||||| | || || || || || || | ||||| Sbjct 816992 AGTCAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGG 816933 Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 | |||| || || ||||| || |||| || || || ||| ||||| | |||||| | Sbjct 816932 CGCTGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCT 816873 Query 114570 GATTTGACTTTGTGTT-ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 | || ||| ||| || | |||||||||||||||| | || | || ||||| || Sbjct 816872 GGTTGCTCTTGCGGTTGGCATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTC 816814 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687 || | | |||||||| | ||||| | || | ||| || ||| ||| || || Sbjct 816813 TGAGCTTCAAGAATAGCGTACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG---CGACC 816761 Query 114688 CT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 114741 || ||| ||| ||||| || | ||| |||||||| || || | || | Sbjct 816760 CTTACCGGCCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGC 816701 Query 114742 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTT 114801 || || || || || ||||| | ||||| ||| | ||| || ||| |||||||| Sbjct 816700 AAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTT 816641 Query 114802 CATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 114861 |||||| || || |||||||| || || ||| | ||| || || | ||||| | Sbjct 816640 CATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTT 816581 Query 114862 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 || || || || | || | || || | || ||| |||||||| || || ||||| Sbjct 816580 TCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTA 816521 Query 114922 CACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGC 114975 | |||| | || | ||| | | ||| |||||| || |||| || ||| Sbjct 816520 GATGGCGAAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCCACGTACCGAGCAGTGTT 816464 Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TA 115033 || || || |||||||| || ||| ||||| || ||||| || || || || Sbjct 816463 GTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTA 816404 Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093 || || || || | || |||| || | ||| || || || ||| ||| ||| Sbjct 816403 TGA-ACCGGTT-GCGCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAG 816346 Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153 || || ||| | |||| || ||||||| || || || ||| |||| | | Sbjct 816345 ATCATGGCACACGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCA 816286 Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213 | | |||||| || | || ||| || |||||||||||||||||||| || | Sbjct 816285 ACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAG 816226 Query 115214 GCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC-GGCGGGAATGT 115271 |||||| | || | || | |||||| | ||||||||| | ||| || | |||| Sbjct 816225 GCGTGGGT-AAAAAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCG-ATGT 816168 Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 | || || ||||| | ||||| ||||| | ||||| || ||| Sbjct 816167 CATCACCCCAGATACCCACAGAGACACGCATGATCATGTGCTGTGGT 816121 >seq12 Length=1358207 Score = 102 bits (112), Expect = 1e-16 Identities = 165/231 (71%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || ||||| ||||||||||| ||||| || |||||| || || |||||||| || Sbjct 114291 GTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAACCAGGCATGAGGCC 114232 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | | ||| | ||| ||||||||| ||||| || Sbjct 114231 GCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAGATGCCCTCTACTGC 114172 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCA-AACCACTTCAT 126234 || || |||| || || | ||| |||| | |||| |||| | | | |||| || Sbjct 114171 AGCAAAGGCAACAAGGCGTTGAGCGAAGGTG---GACTGCTTGTCTGAGATCCACCGCAA 114115 Query 126235 CGCCCACTGCGCCTT-TTTCTCGATACACGGGAC--GGTCTGGATCGCTTC 126282 ||||||| ||||| ||||| ||| || || || | |||| | ||||| Sbjct 114114 TGCCCACTCAGCCTTCTTTCT-GATGCAAGGAACTGGACCTGGTTAGCTTC 114065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349911341520