Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 7e-18
seq461 91.5 1e-13
seq8 86.0 6e-12
>seq2
Length=4202288
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | || || || || | || ||||| || ||||||||||| ||
Sbjct 1893218 ACCGCCACGGAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCT 1893277
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| |||| || |||||||| || ||| | || || ||||||||||| || ||
Sbjct 1893278 CAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 1893337
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | |||||| | |||||
Sbjct 1893338 GATACCCTCCTTGTCCTGAATCTTAGACTTCACATTGTCGATGGTATCAGATGACTCCAC 1893397
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | |||||| || || || || || ||||| ||||||||
Sbjct 1893398 CTCCAGAGTAATGGTCTTTCCAGTTAAGGTCTTGACGAAGATTTGCAT 1893445
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || || || | || ||||| || ||||||||||| || |
Sbjct 1893446 ACCACCACGAAGTCGCAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGA 1893505
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || |||||||| ||||| |||| || ||||||||||| || ||
Sbjct 1893506 CAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGGGG 1893565
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || || || ||
Sbjct 1893566 AATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCAAC 1893625
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|| | ||| | ||||||||| || | || || ||||
Sbjct 1893626 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 1893663
>seq461
Length=561
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| |||||| || || || ||||||||||| || | || || |||||||||| ||
Sbjct 560 TGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCGTCTTCAAGTTGT 501
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| | || | || ||||||||| || || || || || || || || || ||
Sbjct 500 TTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTC 441
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | || || | ||||| || | ||| | ||||| || |||
Sbjct 440 GCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTC 381
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || |||||||| |||||
Sbjct 380 AATGTCTTCACGAAAATCTGCAT 358
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || |||||||| || |||| ||| | ||||||| ||||| || |||
Sbjct 326 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCTAGCTGTTTTCCG 267
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | | ||| ||||| || ||||||||||| || || || || || |||
Sbjct 266 GCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTC 207
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | ||||| || | || | ||| || |||||||| |||
Sbjct 206 ACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTTCCGGTCAAGGTT 147
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 146 TTCACAAAGATCTGCAT 130
>seq8
Length=1962940
Score = 86.0 bits (94), Expect = 6e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | || |||||| | || ||||||||||||||||| | ||
Sbjct 146541 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 146482
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| || ||||| || || || || || || || ||| ||| ||
Sbjct 146481 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 146422
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
| || || || || || || | || | ||||||||| || | || || ||||||
Sbjct 146421 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 146362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499641714693360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |