Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 260 1e-64 >seq4 Length=2550084 Score = 260 bits (288), Expect = 1e-64 Identities = 612/921 (66%), Gaps = 2/921 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||||||| ||||||||||| ||||| |||||| Sbjct 816047 AACTACCAGTACTTCGGCTTCAAGACTCTGGAGCGATCGTACCTCCTTAAGATCGATGGC 816106 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| ||| | | || || || | Sbjct 816107 AAGATTGTCGAGCGACCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGAT 816166 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| | | | | || |||| ||| | |||| ||| Sbjct 816167 GACATCGAGCGTGTCCTCGAGACCTACAACCTCATGTCCATGAAGTTTTTTACCCACGCC 816226 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| ||||| |||||||| || ||||| ||| ||| | ||||| || ||| || | Sbjct 816227 TCCCCCACCCTCTTCAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTT 816286 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| ||| || || | ||||| ||||||| ||||| | || Sbjct 816287 GAC-ATGAAGGAGGACAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGAT 816345 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || ||||| ||| |||||| | || || | ||||| || Sbjct 816346 CTCCAAGATGGCTGGTGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTCATA 816405 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| |||||||||||| |||||||| || || ||| ||||| || ||||||||||| Sbjct 816406 CATTGCCGGTACCAATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAA 816465 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||||||||||||||| | | | ||| ||||||| |||| || Sbjct 816466 CACTGCTCGGTACGTGGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCT 816525 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | ||| ||||||| || ||||||||||| || || Sbjct 816526 TGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGA 816585 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | || | ||| ||| || ||| | || || || || ||||| || Sbjct 816586 AGAGGTCCGAGCCCGTGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCG 816645 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||||| ||| | ||||| ||| | || |||||||| || || || || |||| Sbjct 816646 TGTCGAGAAGAACGGTGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGA 816705 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | || | ||||| | |||||||| || || | || |||| | Sbjct 816706 TTGCTACGGCGAGGAGTTTGAGGCCTTGTATGAGAAGTATGAGAAGGCCGGTAAGGGTCG 816765 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| | || |||||| ||| | || | || | ||| ||||| || Sbjct 816766 CAAGACCATGAAGGCCCAGAAGCTCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGG 816825 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 || |||| ||| | | |||||| || |||| |||| ||||||| || ||||||| Sbjct 816826 TAACCCCTTCATGCTTTACAAGGATCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGG 816885 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 || ||||| || |||||||| || || |||| || | | || || || | Sbjct 816886 CACTATTCGCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGT 816945 Query 94614 TGCTGTGTGTAACCTGGGCTC 94634 ||| || || ||||| | ||| Sbjct 816946 TGCCGTCTGCAACCTTGCCTC 816966 Score = 100 bits (110), Expect = 3e-16 Identities = 274/417 (66%), Gaps = 16/417 (4%) Strand=Plus/Plus Query 95003 TTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCG 95062 ||||||||||| | ||| ||||| || || | || | |||||||| | || || | Sbjct 817323 TTCAGTTCGACATGTGGAACGTGAAACCTTCCGAGCTCTGGGACTGGGAGCCGCTCCGAG 817382 Query 95063 CTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCT 95122 | || | | |||||| | ||| ||||| |||| |||||||| || || Sbjct 817383 AGCAGGTCAAGGAGCACGGTATCCGCAACAGTCTGCTCCTGGCACCCATGCCTACTGCTA 817442 Query 95123 CCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182 || | |||||||| || |||||||||| ||||| || | ||| |||||| | ||| Sbjct 817443 GTACATCTCAGATCCTGGGTAACAACGAGTGCTTCGAGCCTTACACATCCAACATCTACT 817502 Query 95183 ACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-- 95240 | || || || ||||| || |||| || ||||| ||||| ||| || Sbjct 817503 CTCGTCGTGTCCTTGCCGGCGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGATCTCG 817562 Query 95241 --GACGT----CTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA 95294 ||| | || ||| | || ||| || |||| || |||| | | Sbjct 817563 TTGACATGGGCCTATGGTCGGATGCTATGAAAAAC---AGAATCAT-TGCT----GAAGA 817614 Query 95295 CGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGT 95354 ||||||| ||||||||||||| | || || | ||| | ||||| |||||||||||||| Sbjct 817615 CGGCTCCATCCAGAACATCCCCAACATCCCCGCGGATGTTAAGGCTCTCTACAAGACCGT 817674 Query 95355 GTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 ||||||||| | |||||| | | || | || |||| ||| || ||||||| Sbjct 817675 GTGGGAGATTTCCCAGCGCCAGGTCGTCCAGATGGCTGCCGACCGAGGCGCCTTCAT 817731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720145084240