Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 179 5e-40
seq12 102 1e-16
>seq4
Length=2550084
Score = 179 bits (198), Expect = 5e-40
Identities = 1128/1784 (63%), Gaps = 61/1784 (3%)
Strand=Plus/Minus
Query 115528 AACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCC 115587
|| ||||||||| || ||||| | |||||||||||||| || |||||||| ||
Sbjct 817875 AATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGACCA 817816
Query 115588 TGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAG 115647
|||||||| | | ||||| || | |||| | || || || |||| |
Sbjct 817815 AGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCTTTCATGTGG 817756
Query 115648 AGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACA 115707
| ||| | || ||||| || |||||| || || || || ||||| | | ||
Sbjct 817755 ATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGAC- 817697
Query 115708 TCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764
|| || | || |||||||| || ||||||| ||||| ||| | |||||
Sbjct 817696 --CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATG 817639
Query 115765 TCCACGATATTTTGGATAGAGCCACCT---GCCTTGACCATGAGATCCTTCATATCCTTT 115821
| ||| || ||||| ||||| || || ||| || | |||||| | |
Sbjct 817638 TTGGGGATGTTCTGGATGGAGCCGTCTTCAGCAATGATTCTG---TTTTTCATAGCATCC 817582
Query 115822 GACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCA 115881
||||| || || || | |||||||| | ||| |||||||| |||||
Sbjct 817581 GACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCG 817522
Query 115882 CCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTT 115940
|| || ||| || | ||| |||||||||| ||||| ||||| |||||||| |||||
Sbjct 817521 CCGGCAAGGACACGACG-AGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTT 817463
Query 115941 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000
||||| ||| || | ||| || || ||||||||||||| ||| || ||||||||||
Sbjct 817462 ACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGAT 817403
Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT---TTGTCTC 116057
||| | || | | | || ||| | |||||||| | ||||| | |
Sbjct 817402 ACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCAGTCCCA---GAGCTCGGAAGGTTT 817346
Query 116058 CCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 116117
| | | |||||| || ||||| |||||||||| || || || || |||| || ||
Sbjct 817345 CACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGA 817286
Query 116118 ATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174
|| || ||||| ||| || | | |||| ||| | || |||||||| ||
Sbjct 817285 GTAGGGACCCTCCTCCTTGGCAAGCTGCACGGA---CGCAGTCAAAGCAGCGTGATAGAT 817229
Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA 116234
|||||||| || | |||| | ||||| ||| ||||| | | |||
Sbjct 817228 AGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCGGAG 817169
Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294
|| || |||| || ||||| |||||||||| || || || || || | ||| ||
Sbjct 817168 GGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCATGTT 817109
Query 116295 AGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
|| ||||| ||| || || ||| || ||| || | | | || || ||
Sbjct 817108 GCTGTTGCGAGC---CTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGTT 817052
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411
| |||| || || | || || | ||||| | | ||| ||| | | |
Sbjct 817051 GCGGACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGTA 816992
Query 116412 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 116471
| || | ||| ||||| | || || || || || || | ||||| |
Sbjct 816991 GTCAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGC 816932
Query 116472 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 116531
|||| || || ||||| || |||| || || || ||| ||||| | |||||| ||
Sbjct 816931 GCTGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTG 816872
Query 116532 ATTTGACTTTGTGTT-ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTT 116590
|| ||| ||| || | ||||||||| ||||| | || | || ||||| || |
Sbjct 816871 GTTGCTCTTGCGGTTGGCATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCT 816813
Query 116591 GGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 116649
| | | |||||||| | ||| | | || | ||| || ||| ||| || |||
Sbjct 816812 GAGCTTCAAGAATAGCGTACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG---CGACCC 816760
Query 116650 T------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGA 116702
| ||| ||| ||||| || | |||||||||||| || || ||| || |
Sbjct 816759 TTACCGGCCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTC-GCCGTAGCAATCGGC 816701
Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762
|| || || || || || || | ||||| ||| | ||| || ||| || |||||
Sbjct 816700 AAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTT 816641
Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 116822
|||||| || || |||||||| ||||| ||| | ||| || || | ||||| |
Sbjct 816640 CATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTT 816581
Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882
|| || || || | || | || || | || ||| |||||||| || || |||||
Sbjct 816580 TCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTA 816521
Query 116883 CACCGCGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938
| |||| | ||| | || | | ||| |||||| || |||| || || ||
Sbjct 816520 GATGGCGAAAGCACCGGGTCGCTTGTTG-CCACCCTGGTCCACGTACCGAGCAGTGTTGT 816462
Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACG 116996
| || || |||||||| || ||| ||||| || ||||| || || || || |
Sbjct 816461 TGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTATG 816402
Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056
| || ||| || | || ||||| || | ||| || || || ||| ||| |||||
Sbjct 816401 A-ACCGGTT-GCGCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAGAT 816344
Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116
|| ||| | |||| || ||||||| || || || ||| |||| | | |
Sbjct 816343 CATGGCACACGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAAC 816284
Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176
| |||||| || | || ||| || |||||||||||||||||||| || | ||
Sbjct 816283 CAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGC 816224
Query 117177 GTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTT 117235
|||| | || | || | |||||| | ||||||||| | |||| ||||| |
Sbjct 816223 GTGGGT-AAAAAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCGATGTCAT 816165
Query 117236 CCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
| || ||||| | ||||| ||||| | ||||| || |||
Sbjct 816164 CACCCCAGATACCCACAGAGACACGCATGATCATGTGCTGTGGT 816121
>seq12
Length=1358207
Score = 102 bits (112), Expect = 1e-16
Identities = 165/231 (71%), Gaps = 10/231 (4%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| || ||||| ||||||||||| ||||| || |||||| || ||| |||||||| ||
Sbjct 114291 GTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAACCAGGCATGAGGCC 114232
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||| | |||||| || | | ||| | ||| ||||||||| ||||| ||
Sbjct 114231 GCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAGATGCCCTCTACTGC 114172
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCAT 127707
|| || |||| || || | || |||| ||||| |||| | | | |||| ||
Sbjct 114171 AGCAAAGGCAACAAGGCGTTGAGCGAAGG---TGGACTGCTTGTCTGAGATCCACCGCAA 114115
Query 127708 CGCCCACTGTGCCTT-TTTCTCGATACATGGGAC--GGTCTGGATCGCTTC 127755
||||||| ||||| ||||| ||| || || || | |||| | |||||
Sbjct 114114 TGCCCACTCAGCCTTCTTTCT-GATGCAAGGAACTGGACCTGGTTAGCTTC 114065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503411593040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |