Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 4e-29
seq12 116 6e-21
>seq4
Length=2550084
Score = 143 bits (158), Expect = 4e-29
Identities = 460/694 (66%), Gaps = 46/694 (7%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATGCCGG 203900
|| || || || ||||||| || || | || |||||| | | || |||||||||||||
Sbjct 817884 TCGACAGTAAATTGAATGG-GTGCAGCAGC-GGCCTGGGTACGGAGGTAGTACATGCCGG 817827
Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960
|||| || || || ||| ||| | ||||||| | | |||| || | ||||||
Sbjct 817826 TCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGT 817767
Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019
| |||||| ||||| || ||||| |||||| ||||| |||||| || || || |||
Sbjct 817766 CTTTCATGTGGATGTTGAGGGACTGAGATTGGTCAATGAA-GGCGCCTCGGTCGGCAGCC 817708
Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACAC-GTCT------ 204070
|| | || | ||| ||| |||||||||||||| |||||| | | | ||
Sbjct 817707 ATCTGGACGACCTGGCG--CTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACAT 817650
Query 204071 ---CTGGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGT 204127
| || ||||| || || ||| ||| ||||||| || || || | |
Sbjct 817649 CCGCGGGGATGTTGGGG---ATGTTCTG-------GATGGAGCCGTCTTCAGCAATGATT 817600
Query 204128 CTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGG 204187
|| | || | | ||| ||| | ||||| | || ||| | || ||||
Sbjct 817599 CTGTTTTTCATAGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGAGGAGCCAGGGG 817540
Query 204188 TTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGT 204247
|||| | ||| || || |||| || || | || | | | | |||| ||| | ||
Sbjct 817539 TTGACAACCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGTGTAAGGC 817480
Query 204248 TCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGG 204307
||||| ||||||||| || | ||||||| || || || || |||||||| ||||||
Sbjct 817479 TCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGG 817420
Query 204308 AGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGG--TCCAGTCGT 204365
||||| |||||| | ||||| | | || ||||| | || ||| || ||||||
Sbjct 817419 AGCAGACTGTTGCGGATACCGTGCTCCTTGA-CCTGCTC-TCGGAGCGGCTCCCAGTC-- 817364
Query 204366 GCATCGCACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGG 204423
|| || | | ||||||||| ||||||||||||||||| ||| |||| | | | ||
Sbjct 817363 CCAGAGCTCGGAAGGTTTCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGG 817304
Query 204424 GCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCA 204482
||||||| | || | || || ||||| | || ||| ||||| || || | ||
Sbjct 817303 AGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGC-TGCACGGACGCAGTCA 817245
Query 204483 ---TGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
||||||||| || ||||||||||| ||
Sbjct 817244 AAGCAGCGTGATAG---ATAGTCTCAAAGATTTG 817214
>seq12
Length=1358207
Score = 116 bits (128), Expect = 6e-21
Identities = 331/500 (66%), Gaps = 13/500 (3%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||| || |||| |||||
Sbjct 114576 CTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTTTCCATAAAGTCGAAGGGGTT 114517
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| | || || || |||| | ||||| || | || | | || || || || |
Sbjct 114516 CGTAGACTTG-TACACCTTCTCATTGCCGAGGGCAACAAGAAGACGATCGGCTACGAACT 114458
Query 159768 CGATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTC 159825
| || || ||| || | | || |||| || || || | | ||| ||||||||
Sbjct 114457 CAATATATTGCTTCA--TGAGATCGGAGTTCATGCCGAGTAAAGCACAGGGAAGCGCTTC 114400
Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGC-GAGACACGTTCGT 159884
| ||||| |||||||| || ||| || ||||| | || | | || ||| | | |
Sbjct 114399 AGTGAGAAATTCCTTCTCGATAGTGACAGCATCGGTGATGATATCCTGAATCACTTGCTT 114340
Query 159885 ACCCCGGCTTG-CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
| ||| | ||| || ||| | | |||| || || |||||| ||||||
Sbjct 114339 GCT--GGCACGGCCCTTAAGGTGAGAGTGGAGCAGG---CAAGCGAAGTCGGTGTGCAGG 114285
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
||||| || || ||||| | ||||| || | | | | || ||||||| || |||
Sbjct 114284 CCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAACCAGGCATGAGGCCGCGCTTC 114225
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063
|||||||| || |||| ||||||||||| || || ||||| ||||| || || |||||
Sbjct 114224 TTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAGATGCCCTCTACTGCAGCAAAG 114165
Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123
|| || || | | | | || | || | |||| | |||||| ||||| |||
Sbjct 114164 GCAACAAGGCGTTGAGCGAAGGTGGACTGCTTGTCTGAGATCCACCGCAATGCCCACTCA 114105
Query 160124 GCCTTCTTTGCGATGCACGG 160143
||||||||| |||||| ||
Sbjct 114104 GCCTTCTTTCTGATGCAAGG 114085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795150289916640
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