Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 253 3e-62 seq485 233 2e-56 >seq1 Length=5148149 Score = 253 bits (280), Expect = 3e-62 Identities = 465/680 (68%), Gaps = 6/680 (1%) Strand=Plus/Minus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || || || ||||| | | |||||| || ||| | |||||||| Sbjct 1980055 TTCTTGTGCTTGCGCTTGAACTCGTTAACGAAGTGGTTAACGAGGCGGTTGTCGAAATCC 1979996 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| || || || || || | ||||| || |||||||| | || ||| Sbjct 1979995 TCACCACCCAAGTGGGTGTCACCAGCAGTAGACTTGACCTCGAAGATACCCTCCTCGATG 1979936 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | | |||||||| || ||||||||||| || || || ||||| ||||| || Sbjct 1979935 GTGAGGAGAGAAACATCGAAAGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCA 1979876 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | || ||||| || |||||||| ||||| || || || || || || || || || Sbjct 1979875 CCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCAGTAGGCTCGTTGATGATT 1979816 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 || || ||||||||||||||| | ||||| || || || || || || ||| Sbjct 1979815 CGCAGGACGTTCAGGCCAGCAATGAGACCAGCATCCTTGGTAGCCTGACGCTGGCTGTCG 1979756 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || |||||||| ||||| || ||||| |||| |||| ||| ||| || || | || Sbjct 1979755 TTGAAGTAGGCGGGGACGGTGACGACGGCGTTGTTGACGGTCTCACCAAGGTAGGCCTCA 1979696 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 || | || ||| ||||| || ||||| || || || || |||| | || | || Sbjct 1979695 GCAGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATTTCCTCAGGAGTGAAGTTCTTG 1979636 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 || || || || || || || || || | || || |||| | ||| | ||| Sbjct 1979635 GTCTCGCCCTTGAACTCGACCTCGATGACAGGCTT---GCCAGCCTTGTCGATGATCTTG 1979579 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 | | | | ||||||||| | || |||| | ||| || ||||| | || || | Sbjct 1979578 AAGGGGAAGTGCTTCATATCGGCCTGCACCTCGTTGTCGGAGAACTTGCGACCAATCAAT 1979519 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 ||||| || || || || ||||| | |||||||||||| |||||||| || || || Sbjct 1979518 CGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCA 1979459 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 ||||||||||| || | || || || ||||| | || || || ||||| || || Sbjct 1979458 CCGATAAGACGCTC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTGGTTCGGTTACCC 1979402 Query 8066 TGGTCGTTCGCAATAATTTC 8085 |||||||| ||||| || || Sbjct 1979401 TGGTCGTTGGCAATGATATC 1979382 >seq485 Length=513 Score = 233 bits (258), Expect = 2e-56 Identities = 362/513 (71%), Gaps = 8/513 (2%) Strand=Plus/Minus Query 7153 AACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGG 7212 ||||| ||| | ||| | ||| || ||||||| ||||| | ||||| ||||| Sbjct 512 AACGACTTCGTGGACTGTGCTTTTGTCCATCTTTGCGTCTCTCAAACACTTTTCAACAGG 453 Query 7213 TTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA 7272 ||||||||||| | ||| | ||||| ||| || ||||| | |||||||| |||| Sbjct 452 CTCCATACATTTTCTGAAGAGATCCATGTTCAGCTCTTCAAATCTGGCACGGGTTATGGT 393 Query 7273 TGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGA 7332 | |||||||| || || || || || || || ||||| || || ||||| || || || Sbjct 392 GGAGTAGAAATCGACACCTTCATACAAAGAGTCTATTTCGATTGTGGTTTGAGCGGTGGA 333 Query 7333 AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 ||||| || | || || | ||| || | |||| ||| | | || || | ||||| Sbjct 332 CGATAAAGTCCTTTTAGCTCTCTCGCAAGAGGTTCTTAACCTTCTCAGAGCTCTTGGGTT 273 Query 7393 ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCT 7452 |||| || ||||||||||| || | ||| ||||||| | ||| || | | ||| Sbjct 272 TCCGGTGATGTCTTTCTTATGCTTTCTTTTGAACTCTTGAACGAAATGGTTGACCATTCT 213 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 || |||||||| ||||| | || || || || ||||| | ||| ||||||||||| Sbjct 212 GTTGTCAAAATCTTCTCCACCGAGATGAGTGTCACCGGCGGTTGATTTCACTTCAAAGAT 153 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 |||| |||| || | || | || ||||| || ||||||||||| |||||||| || || Sbjct 152 ACCTTCTTCGATCGTCAAAAGAGACACATCGAAAGTACCACCACCGAGGTCAAAGATAAG 93 Query 7573 TACGTTCGTATCGTCG----TCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGC 7626 |||||| | || || || ||| ||||| || | |||||| || || || || || Sbjct 92 AACGTTCTTCTCTCCGACGCTCGTTGCTTTCTTGTCTAAACCGTAAGCAATTGCAGCGGC 33 Query 7627 CGTTGGTTCATTAATAATACG-AAGACAGTTCA 7658 ||||| || || || ||||| | |||| |||| Sbjct 32 GGTTGGCTCGTTGATGATACGCATGACA-TTCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128878054960