Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 253 3e-62 seq12 95.1 2e-14 seq10 95.1 2e-14 >seq4 Length=2550084 Score = 253 bits (280), Expect = 3e-62 Identities = 916/1410 (65%), Gaps = 65/1410 (5%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| ||| | | |||||| || || || || || ||| Sbjct 816122 CCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTC 816181 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || |||||| | || | || | |||||| | || |||||||| Sbjct 816182 CTCGAGACCTACAACCTCATGTCCATGAAGTTTTTT-ACCCACGCCTCCCCCACCCTCTT 816240 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| || ||||| | || || ||| | ||| | |||||||| Sbjct 816241 CAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGA 816300 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||| |||| |||||| ||||| ||| |||||| Sbjct 816301 CAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGG 816360 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 ||| ||||| | || |||| || | || ||| || || || || ||||| Sbjct 816361 TGGCATCGGTCTCAACGTCCACCGAATCCGCGC-AACCGGT-TCATACATTGCCGGTACC 816418 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 |||||| || ||||| | | || |||||||| || || ||| ||| || || || Sbjct 816419 AATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTAC 816478 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || |||| |||| |||||||| ||| Sbjct 816479 GTGGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTCGCCATCTACCTTGAGCCTTGG 816535 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||||| ||| || | |||||||| || | || ||||| || | || |||| || Sbjct 816536 CACGCCGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGA 816595 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| ||| | ||| ||| || ||||| || ||||| ||||||||| | || ||| || Sbjct 816596 GCCCGTGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAG 816655 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || | ||| ||||| | || || | || || || || ||||| | || Sbjct 816656 AACGGTGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGC 816715 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGACTGCG 112256 ||||||||||| ||| | || ||||| ||| | | | |||| ||| | Sbjct 816716 GAGGAGTTTGAGGCCTTGTATGAGAAGTATGAGAAGGCCGGTAAGGGTCGCAAGACCATG 816775 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 | || |||| || | ||| | |||||||| | |||| || |||||||||| Sbjct 816776 AAGG-CCCAGAAGC-----TCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGGTAAC 816829 Query 112317 CCATATATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||||||||| || | || |||| ||||| || || ||||| | || Sbjct 816830 CCCTTCATGCTTTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 816888 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || |||||||| || || |||||| | |||| | | | ||||| || Sbjct 816889 TATTCGCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGTTGC 816948 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 || || ||||| || || | || || || | || || | | | |||| || | Sbjct 816949 CGTCTGCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGTTGA-CTACA-ACAACGA---T 817003 Query 112496 TGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 || ||||| |||| | ||||| ||||| | |||||| ||||| |||| Sbjct 817004 TG-TTATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGTCCGCAACCTGAACAA 817062 Query 112550 AGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACA 112606 | |||||| || |||||| || |||| ||||| || || ||| | || Sbjct 817063 GATCATTGATGTCAACCATTACCCTGTTCCTGAG---GCTCGCAACAGCAACATGCGCCA 817119 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCA 112663 |||||| || ||| |||||||||| ||||| || |||| | ||| ||| || || Sbjct 817120 CCGTCCCATCGGTGTCGGTGTCCAGGGTCTTGCTGATG----CCTTCCTTGCCCTCCGCA 817175 Query 112664 CG-CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722 | | ||||| ||| || || || | || | || |||||||| || |||| Sbjct 817176 TGCCTTTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTTGAGACTATCTATC 817235 Query 112723 ACGCCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 |||| ||| |||| ||| | || | || ||| || ||||| || ||||| Sbjct 817236 ACGCTGCT-TTGACTGCGTCCGTGCAGCTTGCCAAGGAGGAGGGTCCCTACTCCACCTTC 817294 Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA----C 112837 |||| ||||| || || |||| | ||||| || || |||| |||| |||| | | Sbjct 817295 AAGGGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGT-GGAACGTGAAACCTTC 817353 Query 112838 CAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 112897 | |||| || |||||||| | ||| || | |||||||| | ||| | || || Sbjct 817354 CGAGCT---CTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGGTATCCGCAA 817410 Query 112898 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 112957 |||||| | ||||||| ||||| || || || | || ||| ||||||| || || Sbjct 817411 CAGTCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGGTAACAACGA 817470 Query 112958 ATGCTTTGAACCCTACACGACGAACATCTA 112987 ||||| || || ||||| | |||||||| Sbjct 817471 GTGCTTCGAGCCTTACACATCCAACATCTA 817500 >seq12 Length=1358207 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 102165 ||||||| || || |||||| || || ||||| || |||| | | | |||| ||| Sbjct 114080 CAGTTCCTTGCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGT 114139 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | |||| ||| | || || | || ||||| || ||||| ||||||||| || Sbjct 114140 CCA---CCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTG 114196 Query 102226 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284 || | || ||| | || | |||||||||||||| || |||||||| ||| | |||| Sbjct 114197 GTGCTTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTC 114255 Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || ||||| || ||||| ||||| ||||| || ||| Sbjct 114256 TCAAACGAACTGATCTCCCGTGATGAGGGCCTGCAC 114291 >seq10 Length=1519455 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| || || || |||||||| | |||||| ||| || | |||| | | | || || Sbjct 586757 GGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTGCGACCCTCAGCGAATAG 586816 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 ||| || || || || || |||||||||||||||||||| || | | || || Sbjct 586817 ATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACGAACTCAGAACCGCTCAC 586876 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | ||||| || ||| || || ||| | || |||||| ||||||||||| | Sbjct 586877 GCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGGCGAGCAGAGTCTTACCAG 586935 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||| || || ||||| | ||| ||||| ||||||||||| || Sbjct 586936 TACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGGCTCC 586981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738566915680