Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4 253 3e-62
seq12 95.1 2e-14
seq10 95.1 2e-14
>seq4
Length=2550084
Score = 253 bits (280), Expect = 3e-62
Identities = 916/1410 (65%), Gaps = 65/1410 (5%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| ||||||| ||| | | |||||| || || || || || |||
Sbjct 816122 CCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTC 816181
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || |||||| | || | || | |||||| | || ||||||||
Sbjct 816182 CTCGAGACCTACAACCTCATGTCCATGAAGTTTTTT-ACCCACGCCTCCCCCACCCTCTT 816240
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||||||||| || ||||| | || || ||| | ||| | ||||||||
Sbjct 816241 CAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGA 816300
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | || || |||| ||| |||| |||||| ||||| ||| ||||||
Sbjct 816301 CAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGG 816360
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908
||| ||||| | || |||| || | || ||| || || || || |||||
Sbjct 816361 TGGCATCGGTCTCAACGTCCACCGAATCCGCGC-AACCGGT-TCATACATTGCCGGTACC 816418
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|||||| || ||||| | | || |||||||| || || ||| ||| || || ||
Sbjct 816419 AATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTAC 816478
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||| | ||| ||| | | || || |||| |||| |||||||| |||
Sbjct 816479 GTGGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTCGCCATCTACCTTGAGCCTTGG 816535
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||||| ||| || | |||||||| || | || ||||| || | || |||| ||
Sbjct 816536 CACGCCGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGA 816595
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
||| ||| | ||| ||| || ||||| || ||||| ||||||||| | || ||| ||
Sbjct 816596 GCCCGTGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAG 816655
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202
| || | ||| ||||| | || || | || || || || ||||| | ||
Sbjct 816656 AACGGTGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGC 816715
Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGACTGCG 112256
||||||||||| ||| | || ||||| ||| | | | |||| ||| |
Sbjct 816716 GAGGAGTTTGAGGCCTTGTATGAGAAGTATGAGAAGGCCGGTAAGGGTCGCAAGACCATG 816775
Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316
| || |||| || | ||| | |||||||| | |||| || ||||||||||
Sbjct 816776 AAGG-CCCAGAAGC-----TCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGGTAAC 816829
Query 112317 CCATATATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375
|| | ||||||||||| || | || |||| ||||| || || ||||| | ||
Sbjct 816830 CCCTTCATGCTTTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 816888
Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435
|| || |||||||| || || |||||| | |||| | | | ||||| ||
Sbjct 816889 TATTCGCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGTTGC 816948
Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495
|| || ||||| || || | || || || | || || | | | |||| || |
Sbjct 816949 CGTCTGCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGTTGA-CTACA-ACAACGA---T 817003
Query 112496 TGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549
|| ||||| |||| | ||||| ||||| | |||||| ||||| ||||
Sbjct 817004 TG-TTATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGTCCGCAACCTGAACAA 817062
Query 112550 AGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACA 112606
| |||||| || |||||| || |||| ||||| || || ||| | ||
Sbjct 817063 GATCATTGATGTCAACCATTACCCTGTTCCTGAG---GCTCGCAACAGCAACATGCGCCA 817119
Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCA 112663
|||||| || ||| |||||||||| ||||| || |||| | ||| ||| || ||
Sbjct 817120 CCGTCCCATCGGTGTCGGTGTCCAGGGTCTTGCTGATG----CCTTCCTTGCCCTCCGCA 817175
Query 112664 CG-CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722
| | ||||| ||| || || || | || | || |||||||| || ||||
Sbjct 817176 TGCCTTTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTTGAGACTATCTATC 817235
Query 112723 ACGCCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781
|||| ||| |||| ||| | || | || ||| || ||||| || |||||
Sbjct 817236 ACGCTGCT-TTGACTGCGTCCGTGCAGCTTGCCAAGGAGGAGGGTCCCTACTCCACCTTC 817294
Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA----C 112837
|||| ||||| || || |||| | ||||| || || |||| |||| |||| | |
Sbjct 817295 AAGGGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGT-GGAACGTGAAACCTTC 817353
Query 112838 CAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 112897
| |||| || |||||||| | ||| || | |||||||| | ||| | || ||
Sbjct 817354 CGAGCT---CTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGGTATCCGCAA 817410
Query 112898 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 112957
|||||| | ||||||| ||||| || || || | || ||| ||||||| || ||
Sbjct 817411 CAGTCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGGTAACAACGA 817470
Query 112958 ATGCTTTGAACCCTACACGACGAACATCTA 112987
||||| || || ||||| | ||||||||
Sbjct 817471 GTGCTTCGAGCCTTACACATCCAACATCTA 817500
>seq12
Length=1358207
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 102165
||||||| || || |||||| || || ||||| || |||| | | | |||| |||
Sbjct 114080 CAGTTCCTTGCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGT 114139
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| |||| ||| | || || | || ||||| || ||||| ||||||||| ||
Sbjct 114140 CCA---CCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTG 114196
Query 102226 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|| | || ||| | || | |||||||||||||| || |||||||| ||| | ||||
Sbjct 114197 GTGCTTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTC 114255
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|| ||||| || ||||| ||||| ||||| || |||
Sbjct 114256 TCAAACGAACTGATCTCCCGTGATGAGGGCCTGCAC 114291
>seq10
Length=1519455
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || || || |||||||| | |||||| ||| || | |||| | | | || ||
Sbjct 586757 GGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTGCGACCCTCAGCGAATAG 586816
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
||| || || || || || |||||||||||||||||||| || | | || ||
Sbjct 586817 ATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACGAACTCAGAACCGCTCAC 586876
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
|| | ||||| || ||| || || ||| | || |||||| ||||||||||| |
Sbjct 586877 GCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGGCGAGCAGAGTCTTACCAG 586935
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||| || || ||||| | ||| ||||| ||||||||||| ||
Sbjct 586936 TACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGGCTCC 586981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738566915680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |