Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq4 188 8e-43
seq10 127 2e-24
seq6 95.1 1e-14
>seq4
Length=2550084
Score = 188 bits (208), Expect = 8e-43
Identities = 985/1549 (64%), Gaps = 61/1549 (4%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566
|||||||| || || ||||| || || || || ||||| | || || |||
Sbjct 817746 GACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGACCTGGCGCTGG 817687
Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626
||| ||||| || |||||||| | | ||| | ||| |||| |||| ||||||
Sbjct 817686 GAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATGTTGGGGATGTTC 817627
Query 109627 TGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACCAGAGACC 109682
|| || ||||| | ||||| || ||| | ||||| | | |||||| || ||
Sbjct 817626 TGGATGGAGCC----GTCTTCAGCAATGATTCTGTTTTTCATAGCATCCGACCATAGGCC 817571
Query 109683 GACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGT 109742
| | |||||| | | || |||||| || || || || |||||
Sbjct 817570 CATGTCAACGAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGAC 817511
Query 109743 GCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTG 109802
|| || ||||||||| | ||||| || ||||| ||||| ||||| || ||||| ||
Sbjct 817510 ACGACGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTG 817451
Query 109803 TGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862
| || ||| || |||||||| |||| ||| |||||||| |||| ||| | | |||
Sbjct 817450 AGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTT 817391
Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCA 109922
||| |||| || | | ||||| || | || | | || || |||| ||| |
Sbjct 817390 GACCTGCTCTCGGAGCGGCTCCCAGTCCCA--GAGCTCGGAAG---GTTTCACGTTCC-A 817337
Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982
||| || ||||| | ||| |||| |||||||| |||||||| | ||| | ||
Sbjct 817336 CATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACC 817277
Query 109983 CTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039
||| ||| ||| | || |||| | || | | || || ||||| |||||||||||
Sbjct 817276 CTCCTCCTTGGCAAGCTGCACGGACGCAGTC---AAAGCAGCGTGATAGATAGTCTCAAA 817220
Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGAA 110095
|| || |||| |||| ||| | || || || | || ||| |
Sbjct 817219 GATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCGGAGGGCAAGG-- 817162
Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155
|| |||| || |||||||| ||||||| ||| ||||| || || |||||| |
Sbjct 817161 --AAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCATGTTGCTGT 817104
Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215
||||| || |||||| |||| || |||| | || || || |
Sbjct 817103 TGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGA 817044
Query 110216 CAGTCTTCGTGATTTCATGGAGTTT------GTCGTAATCGAACGTTTTCGTCTCCTTAT 110269
|||||| || | || || | || ||| ||| | | |||| | | | |
Sbjct 817043 CAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAA-CAATCGTTGTTG-----TAGT 816990
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
|| || || || || | || ||||| ||||| || | | || || | ||
Sbjct 816989 CAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGC 816930
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
||||||| | ||||| || |||| |||||| || ||| || | ||||||||| |
Sbjct 816929 TGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGT 816870
Query 110390 TCGATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448
| ||| ||| ||||| |||||| || |||||| | ||| ||||||| || |||||
Sbjct 816869 TGCTCTTGCGGTTGGCATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGA 816811
Query 110449 GACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCT 110505
| | ||||| || | ||| | | || | ||| | | ||||| | | |||
Sbjct 816810 GCTTCAAGAATAGCGTACCAGAGCTTCTG-GGCCTTCATGGTCTTGCG--ACCCTTACCG 816754
Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565
||| ||| ||||| |||||| ||||||| |||| ||||| ||| | ||| ||
Sbjct 816753 GCCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCA 816694
Query 110566 TTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625
|| | ||| || | ||| | ||| | || || ||| || | ||||||||||
Sbjct 816693 GGGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAC 816634
Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685
|| ||||| ||||| | ||| ||| | |||||| || ||||||| | || |||
Sbjct 816633 AGATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGG 816574
Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745
|| ||| || || | || || | || ||| | |||||| || || || |||| |||
Sbjct 816573 TTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCG 816514
Query 110746 A------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAG 110799
| || || ||| | | || |||||| || || || || ||| ||||||
Sbjct 816513 AAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAG 816457
Query 110800 ACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTT 110858
|| | ||||| || | | |||| ||| |||||| ||||| ||| | || ||
Sbjct 816456 ACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCG 816397
Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918
|| || || || ||||| | | ||| || ||||| ||| ||| || ||
Sbjct 816396 GTT-GCGCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGC 816338
Query 110919 ACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977
|||| ||| |||| || | || ||||| ||||| || |||| || ||| | |
Sbjct 816337 ACACGTCT-TGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGA 816279
Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
|||| ||||| | ||| || |||| || || || |||||||| || ||
Sbjct 816278 AGCATGAAGATAGCTGGGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGG 816230
>seq10
Length=1519455
Score = 127 bits (140), Expect = 2e-24
Identities = 317/473 (67%), Gaps = 40/473 (8%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| || || || || || || | || || | || || ||||| | ||||| ||| ||
Sbjct 586572 CGGTCAAATCGTCCAGGTCGCATCAGGGCCTTGTCGAGCATATCTGCTCGGTTGGTACCG 586631
Query 11563 GCAATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619
|| | || |||| ||| |||| | ||| ||||||||||||||| || |||| ||||
Sbjct 586632 GCTAACACGACAACTTGC---TCTCGTGTGTTGAAACCGTCCATTTCCGTCAGAATCTGG 586688
Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTG----CCGAACGCTT-CT 11674
|||| || || || || ||||| |||||| |||| ||||| ||
Sbjct 586689 TTGAGAGTAGCCTCGCGTTCGTCGTT---------ACCACCAAATCCCCGACCGCTTTCT 586739
Query 11675 T----------ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA 11724
| ||| | ||||| || || || ||||| | ||| || ||| |||
Sbjct 586740 TGACGTGCTCGACCAATGGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTG 586799
Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784
|| ||| |||| || || || || || | |||||||| || |||||||| |||
Sbjct 586800 CGACCCTCAGCGAATAGATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACG 586859
Query 11785 AAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAG 11842
|| | | | || | | ||||| |||||||| |||||| ||||| | || |
Sbjct 586860 AACTCAGAACCGCTCA-CGCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGG 586917
Query 11843 CGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGG 11902
|||| ||||||||||| ||||| || | |||||||||| |||||| ||||| |||||||
Sbjct 586918 CGAGCAGAGTCTTACCAGTACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGG 586977
Query 11903 CACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
| || |||| | || | ||| |||| |||||||||| |||| ||||
Sbjct 586978 CTCCGAGCTTCTCGAACT---TCTCGGGCTGCTTGAGGAAGCTGACAAACTCC 587027
>seq6
Length=2236416
Score = 95.1 bits (104), Expect = 1e-14
Identities = 332/509 (65%), Gaps = 27/509 (5%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATC-GACACGGTTTGTAGC 11561
|||||||| || || |||||| || || | ||||| || | | || |||| |||||
Sbjct 1685640 CGATCGAAGCGTCCAGGGCGGGTAAGGGCCTTGTCAAGCATCTTAGGCA-GGTTAGTAGC 1685698
Query 11562 GGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621
| |||||| | || ||||| | || || ||||| | ||| ||||| ||||||||
Sbjct 1685699 GCCAATGATGATGATTTTGGTCTCTTGATCAAATCCGTCAAGTTCAGTGAGGAGCTGGTT 1685758
Query 11622 GATCGTCTGTT---CACGCTCATCGT-TGGAGGGCATACCACCTGCCGAACGCTTCTTAC 11677
| ||||| | | | | | || | ||||| ||| |||| ||
Sbjct 1685759 CAGGGTCTGCTTGGCGTGAGCTTGGTCTCGAGGGT--------TGC-----GCTTGCCAC 1685805
Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT-CG 11736
| | || || | ||||||||| || || || ||| | || || || ||| |
Sbjct 1685806 CTATGGCATCCAACTCATCGATAAACACAATTG-CGGGGGATTTTGACTTGGCTGCGGCA 1685864
Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796
||||| ||||| || ||||| |||||||| || || || |||||| | || | ||
Sbjct 1685865 AAAAGCTCACGAACTCGCTTGGCTCCAACGCCGACAAATATCTCATCAAACTCGCTACCA 1685924
Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
|| | | |||||| || || || ||||| | |||||| || || || || ||
Sbjct 1685925 GACATGTAGAAGAAGGGTACCCCAGCTTCGCCAGCAACGGCTCGTGCAAGTAGCGTTTTG 1685984
Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTCC--A 11913
|| || ||||| | ||| | | || |||| ||| | ||| ||||| | || |
Sbjct 1685985 CCAGTTCCAGGAGGCCCAACCAAGAGAACGCCCTTGGGCAGCTTAGCACCGAGATCAGTA 1686044
Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973
|| | ||||| ||||||||||| || |||| ||||| ||| |||||||||||
Sbjct 1686045 AATTTT---TCAGGGTTCTTGAGGAACTCAACAACCTCCTGAAGCTCCTCCTTGGCCTCA 1686101
Query 11974 TCGATACCCTCAACATCGGTGAAACGAGT 12002
||| || | ||||||| |||| | |||
Sbjct 1686102 TCGCAGCCGTGAACATCGTTGAACCTAGT 1686130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972363073200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |