Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 188 8e-43 seq10 127 2e-24 seq6 95.1 1e-14 >seq4 Length=2550084 Score = 188 bits (208), Expect = 8e-43 Identities = 985/1549 (64%), Gaps = 61/1549 (4%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||| || || ||||| || || || || ||||| | || || ||| Sbjct 817746 GACTGAGATTGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGACCTGGCGCTGG 817687 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 ||| ||||| || |||||||| | | ||| | ||| |||| |||| |||||| Sbjct 817686 GAAATCTCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATGTTGGGGATGTTC 817627 Query 109627 TGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACCAGAGACC 109682 || || ||||| | ||||| || ||| | ||||| | | |||||| || || Sbjct 817626 TGGATGGAGCC----GTCTTCAGCAATGATTCTGTTTTTCATAGCATCCGACCATAGGCC 817571 Query 109683 GACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGT 109742 | | |||||| | | || |||||| || || || || ||||| Sbjct 817570 CATGTCAACGAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGAC 817511 Query 109743 GCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTG 109802 || || ||||||||| | ||||| || ||||| ||||| ||||| || ||||| || Sbjct 817510 ACGACGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTG 817451 Query 109803 TGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862 | || ||| || |||||||| |||| ||| |||||||| |||| ||| | | ||| Sbjct 817450 AGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTT 817391 Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCA 109922 ||| |||| || | | ||||| || | || | | || || |||| ||| | Sbjct 817390 GACCTGCTCTCGGAGCGGCTCCCAGTCCCA--GAGCTCGGAAG---GTTTCACGTTCC-A 817337 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || ||||| | ||| |||| |||||||| |||||||| | ||| | || Sbjct 817336 CATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACC 817277 Query 109983 CTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039 ||| ||| ||| | || |||| | || | | || || ||||| ||||||||||| Sbjct 817276 CTCCTCCTTGGCAAGCTGCACGGACGCAGTC---AAAGCAGCGTGATAGATAGTCTCAAA 817220 Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGAA 110095 || || |||| |||| ||| | || || || | || ||| | Sbjct 817219 GATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCGGAGGGCAAGG-- 817162 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 || |||| || |||||||| ||||||| ||| ||||| || || |||||| | Sbjct 817161 --AAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCATGTTGCTGT 817104 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 ||||| || |||||| |||| || |||| | || || || | Sbjct 817103 TGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGA 817044 Query 110216 CAGTCTTCGTGATTTCATGGAGTTT------GTCGTAATCGAACGTTTTCGTCTCCTTAT 110269 |||||| || | || || | || ||| ||| | | |||| | | | | Sbjct 817043 CAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAA-CAATCGTTGTTG-----TAGT 816990 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 || || || || || | || ||||| ||||| || | | || || | || Sbjct 816989 CAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGC 816930 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 ||||||| | ||||| || |||| |||||| || ||| || | ||||||||| | Sbjct 816929 TGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGT 816870 Query 110390 TCGATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 | ||| ||| ||||| |||||| || |||||| | ||| ||||||| || ||||| Sbjct 816869 TGCTCTTGCGGTTGGCATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGA 816811 Query 110449 GACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCT 110505 | | ||||| || | ||| | | || | ||| | | ||||| | | ||| Sbjct 816810 GCTTCAAGAATAGCGTACCAGAGCTTCTG-GGCCTTCATGGTCTTGCG--ACCCTTACCG 816754 Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 ||| ||| ||||| |||||| ||||||| |||| ||||| ||| | ||| || Sbjct 816753 GCCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCA 816694 Query 110566 TTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625 || | ||| || | ||| | ||| | || || ||| || | |||||||||| Sbjct 816693 GGGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAC 816634 Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685 || ||||| ||||| | ||| ||| | |||||| || ||||||| | || ||| Sbjct 816633 AGATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGG 816574 Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745 || ||| || || | || || | || ||| | |||||| || || || |||| ||| Sbjct 816573 TTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCG 816514 Query 110746 A------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAG 110799 | || || ||| | | || |||||| || || || || ||| |||||| Sbjct 816513 AAAGCACCGGGTCGCTT--GTTG-CCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAG 816457 Query 110800 ACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTT 110858 || | ||||| || | | |||| ||| |||||| ||||| ||| | || || Sbjct 816456 ACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCG 816397 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 || || || || ||||| | | ||| || ||||| ||| ||| || || Sbjct 816396 GTT-GCGCGGATTCGGTGGACGTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGC 816338 Query 110919 ACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 |||| ||| |||| || | || ||||| ||||| || |||| || ||| | | Sbjct 816337 ACACGTCT-TGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGA 816279 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 |||| ||||| | ||| || |||| || || || |||||||| || || Sbjct 816278 AGCATGAAGATAGCTGGGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGG 816230 >seq10 Length=1519455 Score = 127 bits (140), Expect = 2e-24 Identities = 317/473 (67%), Gaps = 40/473 (8%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || || || || || || || | || || | || || ||||| | ||||| ||| || Sbjct 586572 CGGTCAAATCGTCCAGGTCGCATCAGGGCCTTGTCGAGCATATCTGCTCGGTTGGTACCG 586631 Query 11563 GCAATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || |||| ||| |||| | ||| ||||||||||||||| || |||| |||| Sbjct 586632 GCTAACACGACAACTTGC---TCTCGTGTGTTGAAACCGTCCATTTCCGTCAGAATCTGG 586688 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTG----CCGAACGCTT-CT 11674 |||| || || || || ||||| |||||| |||| ||||| || Sbjct 586689 TTGAGAGTAGCCTCGCGTTCGTCGTT---------ACCACCAAATCCCCGACCGCTTTCT 586739 Query 11675 T----------ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA 11724 | ||| | ||||| || || || ||||| | ||| || ||| ||| Sbjct 586740 TGACGTGCTCGACCAATGGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTG 586799 Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784 || ||| |||| || || || || || | |||||||| || |||||||| ||| Sbjct 586800 CGACCCTCAGCGAATAGATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACG 586859 Query 11785 AAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAG 11842 || | | | || | | ||||| |||||||| |||||| ||||| | || | Sbjct 586860 AACTCAGAACCGCTCA-CGCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGG 586917 Query 11843 CGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGG 11902 |||| ||||||||||| ||||| || | |||||||||| |||||| ||||| ||||||| Sbjct 586918 CGAGCAGAGTCTTACCAGTACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGG 586977 Query 11903 CACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 | || |||| | || | ||| |||| |||||||||| |||| |||| Sbjct 586978 CTCCGAGCTTCTCGAACT---TCTCGGGCTGCTTGAGGAAGCTGACAAACTCC 587027 >seq6 Length=2236416 Score = 95.1 bits (104), Expect = 1e-14 Identities = 332/509 (65%), Gaps = 27/509 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATC-GACACGGTTTGTAGC 11561 |||||||| || || |||||| || || | ||||| || | | || |||| ||||| Sbjct 1685640 CGATCGAAGCGTCCAGGGCGGGTAAGGGCCTTGTCAAGCATCTTAGGCA-GGTTAGTAGC 1685698 Query 11562 GGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621 | |||||| | || ||||| | || || ||||| | ||| ||||| |||||||| Sbjct 1685699 GCCAATGATGATGATTTTGGTCTCTTGATCAAATCCGTCAAGTTCAGTGAGGAGCTGGTT 1685758 Query 11622 GATCGTCTGTT---CACGCTCATCGT-TGGAGGGCATACCACCTGCCGAACGCTTCTTAC 11677 | ||||| | | | | | || | ||||| ||| |||| || Sbjct 1685759 CAGGGTCTGCTTGGCGTGAGCTTGGTCTCGAGGGT--------TGC-----GCTTGCCAC 1685805 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT-CG 11736 | | || || | ||||||||| || || || ||| | || || || ||| | Sbjct 1685806 CTATGGCATCCAACTCATCGATAAACACAATTG-CGGGGGATTTTGACTTGGCTGCGGCA 1685864 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 ||||| ||||| || ||||| |||||||| || || || |||||| | || | || Sbjct 1685865 AAAAGCTCACGAACTCGCTTGGCTCCAACGCCGACAAATATCTCATCAAACTCGCTACCA 1685924 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 || | | |||||| || || || ||||| | |||||| || || || || || Sbjct 1685925 GACATGTAGAAGAAGGGTACCCCAGCTTCGCCAGCAACGGCTCGTGCAAGTAGCGTTTTG 1685984 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTCC--A 11913 || || ||||| | ||| | | || |||| ||| | ||| ||||| | || | Sbjct 1685985 CCAGTTCCAGGAGGCCCAACCAAGAGAACGCCCTTGGGCAGCTTAGCACCGAGATCAGTA 1686044 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || | ||||| ||||||||||| || |||| ||||| ||| ||||||||||| Sbjct 1686045 AATTTT---TCAGGGTTCTTGAGGAACTCAACAACCTCCTGAAGCTCCTCCTTGGCCTCA 1686101 Query 11974 TCGATACCCTCAACATCGGTGAAACGAGT 12002 ||| || | ||||||| |||| | ||| Sbjct 1686102 TCGCAGCCGTGAACATCGTTGAACCTAGT 1686130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972363073200