Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq320 158 1e-33
seq229 138 1e-27
>seq320
Length=907
Score = 158 bits (174), Expect = 1e-33
Identities = 339/505 (67%), Gaps = 4/505 (1%)
Strand=Plus/Minus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| || || ||||| ||| | || || ||||| || || ||| | || || |||||
Sbjct 812 ATAACCGGATTTGACTCTTTCTCTTTGCAACCAAATGCTGGAGCTGCTGGAGAATATGCT 753
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| ||| | | |||| || || ||| | ||||||| || | | ||||| |||
Sbjct 752 GGGCTGATGGTTATCCGGGCTTATCATATGGCGAGAGGAGATCATCATCGTAATGTGTGT 693
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
| || || | ||| ||||||||||| |||||||| ||||||| ||| || ||||||
Sbjct 692 ATCATCCCTGTGTCTGCACATGGAACAAATCCTGCAAGTGCTGCTATGTGTGGAATGAAA 633
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841
|| | ||| ||| | ||||| || | || |||| || |||
Sbjct 632 ATTATTACTGTGGGAACTGACTCCAAAGGTAATATCAATATTGAAGAGGTACGCAAGGCT 573
Query 154842 GCAATCATGAATACATTTG--AACTGTCATGTATTATGATTACATACCCATCTACACATG 154899
|| | | | | ||| | || || | ||||| |||| || || ||||| ||||
Sbjct 572 GC--TGAGGCAAACAAGGAGTATCTATCTGCTCTTATGGTTACCTATCCTTCTACTCATG 515
Query 154900 GTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGG 154959
| || | ||| ||| |||| || ||||| ||||||||||||| ||||| |
Sbjct 514 GAGTCTATGAGGAGGGTATTGATGAGATTTGCAAGATTATTCATGACAATGGAGGTCAAG 455
Query 154960 TATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATG 155019
| || | |||||||| || | ||||||||||| ||| || ||| ||| | | ||
Sbjct 454 TTTACATGGATGGAGCTAACATGAATGCACAGGTTGGATTAACAAGTCCAGGGTGGATTG 395
Query 155020 GTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAG 155079
|||| ||||| |||||||||||| | || || ||||| || ||||||||||| ||||| |
Sbjct 394 GTGCTGATGTTTGTCATCTAAACCTTCACAAGACATTTTGCATTCCACATGGTGGTGGTG 335
Query 155080 GTCCTGGCGTAGGTCCTATAGGTGT 155104
| || || | || || || |||||
Sbjct 334 GGCCCGGAATGGGCCCAATTGGTGT 310
>seq229
Length=1513
Score = 138 bits (152), Expect = 1e-27
Identities = 195/272 (72%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 153724 AACCTGTAGGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTC 153783
||||| ||||||| ||| ||||||| ||| ||| | ||||| || ||| | |
Sbjct 1071 AACCTCCTGGTGAGTTTGGAGCCGATATTGTTGTGGGTTCTGCTCAAAGATTCGGTGTCC 1130
Query 153784 CTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAA 153843
| ||||| ||||||||||| || || || || || ||||| | | | ||||| ||||
Sbjct 1131 CAATGGGTTATGGAGGTCCACACGCAGCCTTTTTAGCAACTTCCCAGGAATATAAAAGAA 1190
Query 153844 AGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGTGAAGGTAATAAAGCATACAG 153901
||| || || ||||| | ||| |||||| ||| | || || || | |
Sbjct 1191 TGATGCCCGGAAGAATCATCGGT--GTCAGTGTGGATTCTTCCGGAAAGCCGGCTTTACG 1248
Query 153902 ATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTG 153961
| || | ||||| ||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct 1249 TATGGCCATGCAGACAAGAGAACAGCATATTAGAAGAGACAAAGCAACCAGCAACATCTG 1308
Query 153962 CACAGCTCAGGCACTGCTGGCTAATATGTCTG 153993
||||||||||||| |||| || || ||| |||
Sbjct 1309 CACAGCTCAGGCATTGCTTGCAAACATGGCTG 1340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579209223360960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |