Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq320 158 1e-33 seq229 138 1e-27 >seq320 Length=907 Score = 158 bits (174), Expect = 1e-33 Identities = 339/505 (67%), Gaps = 4/505 (1%) Strand=Plus/Minus Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661 || || || ||||| ||| | || || ||||| || || ||| | || || ||||| Sbjct 812 ATAACCGGATTTGACTCTTTCTCTTTGCAACCAAATGCTGGAGCTGCTGGAGAATATGCT 753 Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721 || ||| | | |||| || || ||| | ||||||| || | | ||||| ||| Sbjct 752 GGGCTGATGGTTATCCGGGCTTATCATATGGCGAGAGGAGATCATCATCGTAATGTGTGT 693 Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 | || || | ||| ||||||||||| |||||||| ||||||| ||| || |||||| Sbjct 692 ATCATCCCTGTGTCTGCACATGGAACAAATCCTGCAAGTGCTGCTATGTGTGGAATGAAA 633 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 || | ||| ||| | ||||| || | || |||| || ||| Sbjct 632 ATTATTACTGTGGGAACTGACTCCAAAGGTAATATCAATATTGAAGAGGTACGCAAGGCT 573 Query 154842 GCAATCATGAATACATTTG--AACTGTCATGTATTATGATTACATACCCATCTACACATG 154899 || | | | | ||| | || || | ||||| |||| || || ||||| |||| Sbjct 572 GC--TGAGGCAAACAAGGAGTATCTATCTGCTCTTATGGTTACCTATCCTTCTACTCATG 515 Query 154900 GTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGG 154959 | || | ||| ||| |||| || ||||| ||||||||||||| ||||| | Sbjct 514 GAGTCTATGAGGAGGGTATTGATGAGATTTGCAAGATTATTCATGACAATGGAGGTCAAG 455 Query 154960 TATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATG 155019 | || | |||||||| || | ||||||||||| ||| || ||| ||| | | || Sbjct 454 TTTACATGGATGGAGCTAACATGAATGCACAGGTTGGATTAACAAGTCCAGGGTGGATTG 395 Query 155020 GTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAG 155079 |||| ||||| |||||||||||| | || || ||||| || ||||||||||| ||||| | Sbjct 394 GTGCTGATGTTTGTCATCTAAACCTTCACAAGACATTTTGCATTCCACATGGTGGTGGTG 335 Query 155080 GTCCTGGCGTAGGTCCTATAGGTGT 155104 | || || | || || || ||||| Sbjct 334 GGCCCGGAATGGGCCCAATTGGTGT 310 >seq229 Length=1513 Score = 138 bits (152), Expect = 1e-27 Identities = 195/272 (72%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 153724 AACCTGTAGGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTC 153783 ||||| ||||||| ||| ||||||| ||| ||| | ||||| || ||| | | Sbjct 1071 AACCTCCTGGTGAGTTTGGAGCCGATATTGTTGTGGGTTCTGCTCAAAGATTCGGTGTCC 1130 Query 153784 CTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAA 153843 | ||||| ||||||||||| || || || || || ||||| | | | ||||| |||| Sbjct 1131 CAATGGGTTATGGAGGTCCACACGCAGCCTTTTTAGCAACTTCCCAGGAATATAAAAGAA 1190 Query 153844 AGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGTGAAGGTAATAAAGCATACAG 153901 ||| || || ||||| | ||| |||||| ||| | || || || | | Sbjct 1191 TGATGCCCGGAAGAATCATCGGT--GTCAGTGTGGATTCTTCCGGAAAGCCGGCTTTACG 1248 Query 153902 ATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTG 153961 | || | ||||| ||||| |||||||| || ||||||||||||||||| |||||||| Sbjct 1249 TATGGCCATGCAGACAAGAGAACAGCATATTAGAAGAGACAAAGCAACCAGCAACATCTG 1308 Query 153962 CACAGCTCAGGCACTGCTGGCTAATATGTCTG 153993 ||||||||||||| |||| || || ||| ||| Sbjct 1309 CACAGCTCAGGCATTGCTTGCAAACATGGCTG 1340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209223360960