Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq320 138 1e-27 seq229 120 4e-22 >seq320 Length=907 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTA 159607 ||||| |||| ||||| ||||| ||||| || | ||| || |||| || | Sbjct 541 TTATGGTTACCTATCCTTCTACTCATGGAGTCTATGAGGAGGGTATTGATGAGATTTGCA 482 Query 159608 AGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGG 159667 ||||| ||||||| ||||| ||||| || || | ||||| || || | |||||||||| Sbjct 481 AGATTATTCATGACAATGGAGGTCAAGTTTACATGGATGGAGCTAACATGAATGCACAGG 422 Query 159668 TAGGTCTAGCAAAACCATG-TGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 | || || ||| ||| | || | |||||| ||||| |||||||||||| | || ||| Sbjct 421 TTGGATTAACAAGTCCAGGGTGGAT-TGGTGCTGATGTTTGTCATCTAAACCTTCACAAG 363 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || ||||||||||| ||||| || || || | || || |||||||| Sbjct 362 ACATTTTGCATTCCACATGGTGGTGGTGGGCCCGGAATGGGCCCAATTGGTGT 310 >seq229 Length=1513 Score = 120 bits (132), Expect = 4e-22 Identities = 191/272 (70%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 158399 AACCTGTAGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTC 158458 ||||| ||||||| ||| || |||| ||| ||| | ||||| || ||| | | Sbjct 1071 AACCTCCTGGTGAGTTTGGAGCCGATATTGTTGTGGGTTCTGCTCAAAGATTCGGTGTCC 1130 Query 158459 CTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAA 158518 | ||||| || |||||||| || || || || || ||||| | | | ||||| |||| Sbjct 1131 CAATGGGTTATGGAGGTCCACACGCAGCCTTTTTAGCAACTTCCCAGGAATATAAAAGAA 1190 Query 158519 AGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAGGTAATAAAGCATACAG 158576 ||| || || ||||| | ||| |||||| ||| || || || | | Sbjct 1191 TGATGCCCGGAAGAATCATCGGT--GTCAGTGTGGATTCTTCCGGAAAGCCGGCTTTACG 1248 Query 158577 ATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTG 158636 | || | ||||| ||||| |||||||| |||||||||||||||||||| |||||||| Sbjct 1249 TATGGCCATGCAGACAAGAGAACAGCATATTAGAAGAGACAAAGCAACCAGCAACATCTG 1308 Query 158637 CACAGCACAAGCACTGCTGGCTAATATGTCTG 158668 |||||| || ||| |||| || || ||| ||| Sbjct 1309 CACAGCTCAGGCATTGCTTGCAAACATGGCTG 1340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047568783840