Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq320 138 1e-27
seq229 120 4e-22
>seq320
Length=907
Score = 138 bits (152), Expect = 1e-27
Identities = 172/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 159548 TTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTA 159607
||||| |||| ||||| ||||| ||||| || | ||| || |||| || |
Sbjct 541 TTATGGTTACCTATCCTTCTACTCATGGAGTCTATGAGGAGGGTATTGATGAGATTTGCA 482
Query 159608 AGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGG 159667
||||| ||||||| ||||| ||||| || || | ||||| || || | ||||||||||
Sbjct 481 AGATTATTCATGACAATGGAGGTCAAGTTTACATGGATGGAGCTAACATGAATGCACAGG 422
Query 159668 TAGGTCTAGCAAAACCATG-TGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
| || || ||| ||| | || | |||||| ||||| |||||||||||| | || |||
Sbjct 421 TTGGATTAACAAGTCCAGGGTGGAT-TGGTGCTGATGTTTGTCATCTAAACCTTCACAAG 363
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||||| || ||||||||||| ||||| || || || | || || ||||||||
Sbjct 362 ACATTTTGCATTCCACATGGTGGTGGTGGGCCCGGAATGGGCCCAATTGGTGT 310
>seq229
Length=1513
Score = 120 bits (132), Expect = 4e-22
Identities = 191/272 (70%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 158399 AACCTGTAGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTC 158458
||||| ||||||| ||| || |||| ||| ||| | ||||| || ||| | |
Sbjct 1071 AACCTCCTGGTGAGTTTGGAGCCGATATTGTTGTGGGTTCTGCTCAAAGATTCGGTGTCC 1130
Query 158459 CTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAA 158518
| ||||| || |||||||| || || || || || ||||| | | | ||||| ||||
Sbjct 1131 CAATGGGTTATGGAGGTCCACACGCAGCCTTTTTAGCAACTTCCCAGGAATATAAAAGAA 1190
Query 158519 AGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAGGTAATAAAGCATACAG 158576
||| || || ||||| | ||| |||||| ||| || || || | |
Sbjct 1191 TGATGCCCGGAAGAATCATCGGT--GTCAGTGTGGATTCTTCCGGAAAGCCGGCTTTACG 1248
Query 158577 ATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTG 158636
| || | ||||| ||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 1249 TATGGCCATGCAGACAAGAGAACAGCATATTAGAAGAGACAAAGCAACCAGCAACATCTG 1308
Query 158637 CACAGCACAAGCACTGCTGGCTAATATGTCTG 158668
|||||| || ||| |||| || || ||| |||
Sbjct 1309 CACAGCTCAGGCATTGCTTGCAAACATGGCTG 1340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047568783840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |