Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4 365 8e-96
seq12 125 1e-23
>seq4
Length=2550084
Score = 365 bits (404), Expect = 8e-96
Identities = 1144/1750 (65%), Gaps = 70/1750 (4%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| ||||| || | || ||||||| |||| ||| || || |||||||||||||||||
Sbjct 817881 ACAGTAAATTGAATGGGTGCAGCAGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 817822
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669
|| || ||| ||||||| | |||||| |||| | | ||| | || |
Sbjct 817821 AGACCAAGCTT---CCAGCCGGTGAAGTGCAT-GCTGGTAAT--CTTGCCC---ATGGTG 817771
Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729
|||| | | |||| | ||| ||||||||| ||||| ||||| | | |
Sbjct 817770 GGGTCTTTCATGTGG---------ATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCT 817720
Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789
| ||| || ||||| | | || | | |||||| | |||||||||||||||| |||
Sbjct 817719 CGGTCGGCAGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA 817660
Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849
| || | ||| | |||| | |||||||||||| | || || || | |||||
Sbjct 817659 GCCTTAACATCCGCGGGGATGTTGGGGATGTTCTGGATGGAGCC-----GTCT--TCAGC 817607
Query 212850 -----TGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAG 212902
| | | ||| | || ||| |||||| || | || ||||| ||
Sbjct 817606 AATGATTCTGTTTTTCATAGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGAGGAG 817547
Query 212903 GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGT 212962
|||||||| | |||||| || || | || || | | ||| | ||| || ||
Sbjct 817546 CCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGT 817487
Query 212963 GTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022
||| ||||||| || ||||||||| ||||| ||||| | || || || || ||||||||
Sbjct 817486 GTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGG 817427
Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCA 213082
|||| || |||||||| | | |||||||| || | || ||| ||||
Sbjct 817426 TGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCA 817367
Query 213083 GTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCC 213142
|||||| | || |||| ||||||||||||||||| ||||| | ||| ||
Sbjct 817366 GTCCCAGAGCTCGGA-AGGT--------TTCACGTTCCACATGTCGAACTGAAGGATACC 817316
Query 213143 TTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA 213202
|| | || ||||| | | | ||||||||| || | ||||||||| |||| |||
Sbjct 817315 TTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCT-GCA 817257
Query 213203 -GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGG 213261
|||||| || ||||||| ||||| || ||||| || | |||| |||| |
Sbjct 817256 CGGACGCAGTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAG 817197
Query 213262 CCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCC 213321
|||| |||||| || ||||| | | |||| ||||||| || |||||||| |
Sbjct 817196 CCTCAGGGGACTCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCCTGGACAC 817137
Query 213322 CGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAG 213380
||| |||||||| | ||| | || ||| ||| |||| ||| | |||||| |
Sbjct 817136 CGACACCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGC-CTCAGGAACAGGGTAATGG 817078
Query 213381 TTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTAC 213440
||| || ||||||||||| ||||||||| | | | ||| || | | || |
Sbjct 817077 TTGACATCAATGATCTTGTTCAGGTTGCGGACGACAGTCTGGGTAACCTCGTGCAACTTT 817018
Query 213441 TCG---TGATTGAACA--CGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGG 213495
| | | || |||| ||| | ||| || || ||||||||| | ||
Sbjct 817017 TGGAAGTCAT--AACAATCGTTGTTGTAGTCA---ACGAATGAAGGCAGGGCCAGCGAGG 816963
Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555
| |||||||| ||||| || || | || | | |||| || ||||| || ||||||||||
Sbjct 816962 CAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCACAGGT 816903
Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGT 213615
|| || || || ||||| ||||||| ||||| ||| ||||||| ||||||||
Sbjct 816902 TGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGATCCTTGT 816843
Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACC 213675
| |||||| ||||| || ||||| ||| | | || || | |||||| | |
Sbjct 816842 AAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGCTTCT 816783
Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGT 213735
|||||| | | | ||| | | ||| | ||| |||| || || | | |
Sbjct 816782 GGGCCTTCATGGTCTTGC-GACCCTTACCGGCCTT--CTCATACTTCTCATACAAGGCCT 816726
Query 213736 TGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795
|| || | ||| || | | || || || || ||| |||||||| |||
Sbjct 816725 CAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCC 816666
Query 213796 AGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854
|||| |||| | |||| ||| | || ||||||||| || |||| ||| |||||| ||||
Sbjct 816665 AGTCACCGTTCTTCTC-GACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAAC 816607
Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914
| || | || | ||| ||| ||| ||| ||||| || || || || || |||
Sbjct 816606 AAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAG 816547
Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971
| || |||||||| ||||| | ||||||||| || || || || | |||| || |||
Sbjct 816546 ACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCC 816487
Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031
|||||||| || || ||||||||| || || | ||| | || |||||
Sbjct 816486 TGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAG 816427
Query 214032 TGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCC 214089
|| ||||| || || || || || |||| || | | | || | | |||| |
Sbjct 816426 GTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTTGAGA--C 816369
Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149
| |||||||| || ||||||||||||||| || | | | || || ||| ||
Sbjct 816368 CGATGCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGGGTGTCGTAGATACCCT 816309
Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209
| |||||||| || | | || | ||||||||| || ||||||||| | | |
Sbjct 816308 CAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTAC 816249
Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269
||| |||||| || |||||| ||| ||| | | |||||| | || | ||| ||||||
Sbjct 816248 CAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAGGTTGTAGG 816189
Query 214270 TCTCCAGGAC 214279
|||| |||||
Sbjct 816188 TCTCGAGGAC 816179
>seq12
Length=1358207
Score = 125 bits (138), Expect = 1e-23
Identities = 346/519 (67%), Gaps = 15/519 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| ||||| || || | ||||| |||||||| ||||| || | | || ||||| ||
Sbjct 114594 CTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTTTC 114535
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||| ||| ||||||||| | | || |||||| | ||| ||| | | || |
Sbjct 114534 CATAAAGTCGAAGGGGTTCGTAGACTTGTACACCT-TCTCATTGCCGAGGGCAACAAGAA 114476
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA-TGAGG 48016
| |||| || ||| |||| || |||| |||||| | ||||||||| | | | |
Sbjct 114475 GACGATCGGCTACGAACTCAATATATTGCTTCATGAGATCGGAGTTCATGCCGAGTAAAG 114416
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||| | || | |||||||| |||||||| || || || || | ||
Sbjct 114415 CACA-GGGAAGCGCTTCAGTGAGAAATTCCTTCTCGATAGTGACAGCATCGGTGATGATA 114357
Query 48077 TGCTTAA-CGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCA 48132
| || || | | | || || || | || | ||||| | | ||||| |||
Sbjct 114356 TCCTGAATCACTTG-CT-TGCTGGCACG--GCCCTTAAGGTGAGAG---TGGAGCAGGCA 114304
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
|| ||||| |||||| ||| || || ||| ||| || |||| |||||| | |||
Sbjct 114303 AGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGTCAAACC 114244
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
|||||||| || | || ||||||||||| || | || |||| ||| |||||||||
Sbjct 114243 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAAGAAGAT 114184
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
|||||| ||||| || || || || | | |||| | | | ||||||||||||
Sbjct 114183 GCCCTCTACTGCAGCAAAGGCAACAAGGCGTTGAGCGAAGGTGGACTGCTTGTCTGAGAT 114124
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||| | ||||| || |||||||| ||||||| ||
Sbjct 114123 CCACCGCAATGCCCACTCAGCCTTCTTTCTGATGCAAGG 114085
Score = 87.8 bits (96), Expect = 3e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||||||||| | ||||| || ||||||||| || ||||| | |||||| |
Sbjct 113956 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAACAACGGGCCTCCGGGA 113897
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| ||||| | | |||| ||| | ||| ||||| ||||| || ||||||||||| |
Sbjct 113896 TCTGAACTTCAGCGCTAAATCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGAAGCGG 113837
Query 48549 CAAAGAAGGCAAG 48561
||||||| |||||
Sbjct 113836 CAAAGAAAGCAAG 113824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931527047784960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |