Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 219 8e-52
seq12 132 9e-26
>seq4
Length=2550084
Score = 219 bits (242), Expect = 8e-52
Identities = 827/1278 (65%), Gaps = 47/1278 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|||| |||||||| ||||| ||||||||||| ||||| || ||| | ||||| ||
Sbjct 817248 GTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAG-CTCACGAGCCTCAGG 817190
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
|| || ||||| || || | ||| | || || || ||||| || |||| |||
Sbjct 817189 GGACTCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACC 817130
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
|||||| | ||| | | ||||| | ||| || || || || || ||| ||||||
Sbjct 817129 GATGGGACGGTGGCGCATGTTGCTGTTGCGA--GCCTCAGGAACAGGGTAATGGTTGACA 817072
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGAT-GACTT--TAACCACCTCGGTCAGCTTCTGG 221650
|| || | ||||| ||||| | || | || ||||| ||| || ||| |||
Sbjct 817071 TCAATGATCTTGTTCAGGTTGCGGACGACAGTCTGGGTAACC---TCGTGCAACTTTTGG 817015
Query 221651 TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACG 221710
| | | ||| ||| || | | || || || | ||||| |
Sbjct 817014 AAGTC--ATAACAAT-------CGTTGTTGTAG---TCAACGAATGAAGGCAGGGCCAGC 816967
Query 221711 CTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAG 221770
||| ||||| || ||||| || || || | | | || | ||||| || || ||
Sbjct 816966 GAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTCAGTGCAC 816907
Query 221771 AGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCC 221830
|||||| || || || || |||| || || || |||||| |||||| |||
Sbjct 816906 AGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGATCC 816847
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||| ||||| ||||| |||||||| |||||| | ||||| || ||||||
Sbjct 816846 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGC 816787
Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATACCCGGTATAG 221947
| ||||| || | | ||||| ||||| ||| ||| |||||| |||
Sbjct 816786 T-TCTGGGCCTT--CATGGTCTTGCG---ACCCTTACCGGCCTTCTCATACTTCTCATAC 816733
Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007
| ||||||| || ||||| ||| | ||||| || ||| ||| |||||
Sbjct 816732 AAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATG 816673
Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067
||| |||||| ||| | | ||| | || |||||| || || |||||||| |||||
Sbjct 816672 AGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCG 816613
Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127
| || | ||| | || || ||| ||| |||| ||| || | || || | |||
Sbjct 816612 AGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAC 816553
Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187
|| || | || |||||||| ||||| || |||| ||| | ||| |||||||||||||||
Sbjct 816552 TCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTG 816493
Query 222188 CCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246
|||||||| |||| | | | ||| | |||||||| ||||| | || | ||
Sbjct 816492 CCACCCTGGTCCA-CGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACC 816434
Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA 222306
||||| ||| ||||| || |||||| | |||| || | || | | || ||
Sbjct 816433 ATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGC---GGATTC-GGTGGA 816378
Query 222307 C----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362
| | ||||| ||||| || || ||||||||||| || ||||||| |||||
Sbjct 816377 CGTTGAGACCGATGCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGGGTGTCGT 816318
Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422
||| ||||| || ||||||||| | || | || || || || || | ||| | |
Sbjct 816317 AGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCT 816258
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
| || || ||||| || || ||||| |||||| ||||| | | | ||||| |
Sbjct 816257 GAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGA 816198
Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCA 222542
| | ||| ||||| | ||| | |||||| || || || || | | | ||
Sbjct 816197 GGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGACACGCA 816138
Query 222543 TGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTT 222600
|| ||||| ||| || | ||| ||| || | || || || |||||||||
Sbjct 816137 TGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCT--TAAGGAGGTACGATCG 816080
Query 222601 TTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGC 222660
|||||||||||||| || ||||| | | || ||||| | | | | || | ||| |
Sbjct 816079 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATGGCAGA 816020
Query 222661 GTCCAGCTCCGACTTGTG 222678
||| |||||| ||||||
Sbjct 816019 GTCTAGCTCCTCCTTGTG 816002
Score = 93.3 bits (102), Expect = 8e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 221155 GTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCT 221214
||| | ||| || ||| | || |||| || ||||||||| ||||||||||||| || ||
Sbjct 817501 GTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTACT 817442
Query 221215 GGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250
|| || ||||||||||||| ||||||||||||||
Sbjct 817441 AGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCG 817406
>seq12
Length=1358207
Score = 132 bits (146), Expect = 9e-26
Identities = 342/523 (65%), Gaps = 33/523 (6%)
Strand=Plus/Plus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT--ACGTT 25871
|||||| | |||||| |||||| || ||||||| ||| || ||| | || ||
Sbjct 114089 GCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCT-CAGACA-AGCAGTCCACCTT 114146
Query 25872 TGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGC 25931
| | || || || ||||||||||| || ||||||||||| ||||| ||| | |||||
Sbjct 114147 CGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTTTGC 114206
Query 25932 GGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
||||||||||||||||| || || |||||| || || ||| || ||||| ||
Sbjct 114207 TTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAAACGAACT 114266
Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC---------AC 26042
||| | | || ||||| || |||| || || || ||||||||| || |
Sbjct 114267 GATCTCCCGTGATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCACTCTCACCTTAA 114326
Query 26043 GGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAG--TATCATCAAAGAGGCT 26100
|||| | ||| | ||| |||| || | ||| |||||||| || |||
Sbjct 114327 GGGC--CGTGC-CAGCAA------GCAAGTGA-----TTCAGGATATCATCACCGATGCT 114372
Query 26101 GTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAAC 26160
|| ||||||||||| |||| | |||||||||
Sbjct 114373 GTCACTATCGAGAAGGAATTTCTCACTGAAGCGCTTCCCTGTGCTTTACTCGGCATGAAC 114432
Query 26161 AACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT--GTGCCAGCTGG 26218
| ||||||| ||||| ||||||| || ||||| | ||| || |||| || |
Sbjct 114433 TCCGATCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCTTCTTGTTGCC--CTCG 114490
Query 26219 GACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGG 26278
| | | | |||| | | ||||| |||||||||||||||||||| || | |
Sbjct 114491 GCAATGAGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCG 114550
Query 26279 AAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|| |||||||||||||| || ||| | ||||| ||||||||
Sbjct 114551 GTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCA 114593
Score = 91.5 bits (100), Expect = 3e-13
Identities = 187/277 (68%), Gaps = 7/277 (3%)
Strand=Plus/Plus
Query 25460 AGGTAACACACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCG 25519
|| |||| || || | || ||| | |||||||||||| | ||| |||||| |
Sbjct 113681 AGCTAACCCAAAATTAGATCTGGCAAATGTACAAGAAGCACGAGGCCTCGTTCTGGACTG 113740
Query 25520 CCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGA 25574
| || || |||||||| ||||||| || | | |||| || || || | |||
Sbjct 113741 CTGAGGAAATTGATCTTTCCAAGGATTTGCATGACTGGAACAACCGCCTGAATGC--AGA 113798
Query 25575 CGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAA 25634
||||||| ||| | || | | || |||||||| || || ||||| || || ||
Sbjct 113799 CGAGCAGTTCTTTGTTTCCCACATTCTTGCTTTCTTTGCCGCTTCAGATGGCATCGTCAA 113858
Query 25635 CGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTA 25694
|||||| ||| |||| |||| | | ||||| ||| | ||||||| ||||||||
Sbjct 113859 CGAGAACCTGGTCGAGCGATTTAGCGCTGAAGTTCAGATCCCGGAGGCCCGTTGTTTCTA 113918
Query 25695 CGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAG 25731
|| |||||||| || || || | |||||||||
Sbjct 113919 TGGCTTCCAGATCATGATGGAGAACATCCACTCTGAG 113955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839064383360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |