Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 3e-23
seq12 98.7 2e-14
seq4 91.5 2e-12
>seq3
Length=2993360
Score = 127 bits (140), Expect = 3e-23
Identities = 91/105 (87%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||||||||| || ||||| || |||||| | || |||||||||||||||||| | |
Sbjct 1231327 CCAACTACCTCGATATTAAGCCTCTTCTCGATGTTGGCTGCAAGACCGTGGCCAACATGA 1231268
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||||| |||||||| || |||||||| || |||||||
Sbjct 1231267 TCAAGGGCAAGTCCCCCGAGGAGATTCGCAAGACATTCAACATCA 1231223
>seq12
Length=1358207
Score = 98.7 bits (108), Expect = 2e-14
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966
||| || || || ||| |||||| |||||||||||||| |||| || || |||||
Sbjct 114591 ATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTTTCCAT 114532
Query 793967 CCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCG 794026
| ||| ||||| | | | ||| |||||| ||||| | |||| || ||
Sbjct 114531 AAAGTCGAAGGGGTTCGTAGACTTGTACACCTTCTCATTGCCGAGGGCAACAAGAAGACG 114472
Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCAC 794086
||||| ||||| ||||| || || |||||| ||| ||||||||||| | ||
Sbjct 114471 ATCGGCTACGAACTCAATATATTGCTTCATGAGATCGGAGTTCATGCCGAGTAAAGCACA 114412
Query 794087 GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
||| |||| || ||| ||| || |||||||| ||| || ||| |||||||
Sbjct 114411 GGGAAGCGCTTCAGTGAGAAATTCCTTCTCGATAGTGACAGCATCGGTGATGAT 114358
Score = 91.5 bits (100), Expect = 2e-12
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| ||| ||||||||||| || ||||||||||| ||||||||||| || ||
Sbjct 113993 GGCTCCTTGATGTATGTGTCGATGAGCAGAGAGTAGGTCTCAGAGTGGATGTTCTCCATC 113934
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
||||||||||||||| || ||
Sbjct 113933 ATGATCTGGAAGCCATAGAAACA 113911
>seq4
Length=2550084
Score = 91.5 bits (100), Expect = 2e-12
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| |||||||| ||| |||| ||||| ||| | |
Sbjct 46997 GTACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCATGCTTGGCAAGTTCACCGGGAAG 46938
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
||| || || |||| ||||||||||| ||
Sbjct 46937 GATGAGACGAACGGAAGTCTGGATCTCACG 46908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916193850966866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |