Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 269 3e-67 seq5 120 3e-22 seq2 109 5e-19 seq461 98.7 1e-15 seq8 98.7 1e-15 seq12 95.1 1e-14 >seq4 Length=2550084 Score = 269 bits (298), Expect = 3e-67 Identities = 1129/1748 (65%), Gaps = 63/1748 (4%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTTATCTTCATC 148118 ||||||||||| ||||| ||||| || ||||| | | || | |||| ||| Sbjct 817737 TGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGACCTGGCGCTGGGAA---ATC 817681 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 ||||| | |||||||| || ||| | || |||| ||| | |||| ||| | Sbjct 817680 TCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATGTTGGGGATGTTCTGGATG 817621 Query 148179 GAGCCGCGGTGCGCAAAAAT-CTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 |||||| | |||| || ||| || ||| | |||| ||||| | || | Sbjct 817620 GAGCCGTCTTCAGCAATGATTCTGTTTTT-CATAGCATCCGACCATAGGCCCATGTCAAC 817562 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 || || | || || | | || || ||||| ||||||||||| || || || || || Sbjct 817561 GAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGACG-AG 817503 Query 148298 A-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 | || | |||| || | || || || |||||||||| |||| ||||| | || Sbjct 817502 AGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTAC 817443 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 | || || |||||| || | ||||| |||||| | |||| | | || | | || Sbjct 817442 TAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTTGACCT-GC 817384 Query 148417 GCTTCAGAGCCGC--CCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474 || | |||| || ||||||||||||| || ||| ||||||||||||||||| |||| Sbjct 817383 TCT-CGGAGCGGCTCCCAGTCCCAGAGCTCGGAAGGTTTCACGTTCCACATGTCGAACTG 817325 Query 148475 CAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534 || || || || || ||||| | | | | ||| || || | | || || Sbjct 817324 AAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGC 817265 Query 148535 CAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 || | ||| | ||| | || ||| || || ||||| ||||| |||| | Sbjct 817264 AAGCT-GCACGGACGCAGTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCA 817206 Query 148594 GC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650 || | ||| | | | || | ||||| || || | || || || |||| Sbjct 817205 GCTCACGAGCCTCAG---GGGACTCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAA 817149 Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGA 148710 | ||||| || || || || ||||| ||||| |||||| | ||| || ||| || Sbjct 817148 GACCCTGGACACCGACACCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGC-CTCAGGA 817090 Query 148711 GC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATT 148769 | || || |||||| || |||||||||| || ||||| || || || |||| Sbjct 817089 ACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACAGTCTGGGTAACC 817030 Query 148770 CTGCGCA------GCAATTC---AAAATCGTACTTGTCATCTACG-ATGCATCGGTTCAC 148819 | ||| | || || | |||||| |||| || ||| ||| | || || Sbjct 817029 TCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGTAGTCAACGAATGAA--GG--CAG 816974 Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 ||| | ||||| || ||||| ||||| ||||| ||||||||||| || | ||| || Sbjct 816973 GGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTC 816914 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT-GC 148938 | |||||| ||| || || ||| | |||||| || |||||||||| ||| || Sbjct 816913 AGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGC 816854 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACC 148998 | | |||||||| |||||| | || ||||| || ||| | ||| | || | | Sbjct 816853 ATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAAT--AGC 816797 Query 148999 GATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTATA 149052 | ||| | | | || ||| || || | |||||||| ||| ||| || Sbjct 816796 GTACCAGAGCTTCTGGGC---CTTCATGGTC-TTGCGACCCTTACCGGCCTTCTCATACT 816741 Query 149053 AAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112 ||||| ||| ||| ||||||||||||||||| | || || ||||||| | | Sbjct 816740 TCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGG 816681 Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172 |||||||||| | ||| | |||| | | || |||||||| |||||||| || | || Sbjct 816680 GGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCC 816621 Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 | |||||| | | || || || | ||||| || ||| ||| |||| Sbjct 816620 ATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGT 816561 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 ||| | ||| | || |||||||| ||||||| ||| | |||| || || | Sbjct 816560 CGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTC 816501 Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349 || ||||| |||||||| |||| || | ||||||| || || |||| ||| || Sbjct 816500 GCTTGTTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGG 816441 Query 149350 CAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGT 149409 | ||| ||| || || || ||| | |||| ||| || || | | || Sbjct 816440 TGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGT 816381 Query 149410 GCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGT 149467 | ||||||| |||||||| || ||| | ||| ||||| || || ||| ||| || Sbjct 816380 GGACGTTGAGACCGATGCCACCAGCCAT-CTTGGAGATCATGGCACACGTC-TTGAGGGT 816323 Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTG 149527 |||||| ||||| |||||||| ||||||| | || ||||| || | | || Sbjct 816322 GTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTG 816263 Query 149528 CGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCT 149587 || | | || || || ||| | ||||||| |||||| |||||| | ||| | Sbjct 816262 GGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGA 816203 Query 149588 CATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGAC 149647 ||| | | ||| | |||||| || || || |||||||| || ||| || | | ||| Sbjct 816202 CATGAGGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGAC 816143 Query 149648 GCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCC 149707 ||||| | ||| ||||| |||||||| | | ||| | || || || | ||| | Sbjct 816142 ACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTA--C 816085 Query 149708 GTT--TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATG 149765 | | || || |||||| |||| ||||||| ||||| ||||| ||| | | | | ||| Sbjct 816084 GATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATG 816025 Query 149766 GCGGCGTC 149773 || | ||| Sbjct 816024 GCAGAGTC 816017 >seq5 Length=2272025 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||| ||| ||||| || ||||| |||| || ||| |||||||||| Sbjct 1174673 AAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGC 1174732 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || ||||||||||| || |||||||| |||||||| |||| Sbjct 1174733 TGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC 1174792 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||||| | |||||| || | ||||| || || || Sbjct 1174793 TTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 1174852 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 1174853 GTGAGGGTCTTGACGAAGATCTGCAT 1174878 >seq2 Length=4202288 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| || ||||| ||| || ||| ||||||||||||||| || Sbjct 1893476 GGTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTTCC 1893535 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 1893536 GGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1893595 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| || ||| || || | |||| ||| ||||| || || || Sbjct 1893596 CACATTGTCGATGGTGTCGGAGGACTCAACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 1893655 Query 133643 TTTTACGA 133650 || |||| Sbjct 1893656 CTTGACGA 1893663 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| || ||||| |||| || ||| ||||||||||||||| || Sbjct 1893248 GGTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGCTGCTTACC 1893307 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || ||||| || |||||||| ||||| ||| Sbjct 1893308 AGCAAAGATAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTAGACTT 1893367 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | |||||| || | || | ||| || || || | || Sbjct 1893368 CACATTGTCGATGGTATCAGATGACTCCACCTCCAGAGTAATGGTCTTTCCAGTTAAGGT 1893427 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 1893428 CTTGACGAAGATTTGCAT 1893445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| ||| | || || || ||||| |||||||| Sbjct 1893760 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCCTCAAGCTGCTTA 1893817 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || || ||||||||||| || || ||||| |||||||| ||||| | Sbjct 1893818 CCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGAC 1893877 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | ||||||| || ||| || || | |||| ||| ||||| || Sbjct 1893878 TTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 1893933 >seq461 Length=561 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| || || ||||| || ||||| ||| | | || ||| || ||| Sbjct 335 AAATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCTAGC 276 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || | | ||| ||||| || || || ||||||||||| |||| Sbjct 275 TGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATC 216 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||||| | |||||| || | ||||| |||||| ||| Sbjct 215 TTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTTCCG 156 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||||| || || ||||||||| Sbjct 155 GTCAAGGTTTTCACAAAGATCTGCATG 129 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| ||| || || || || || || || || | Sbjct 554 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCG--TCTTCAAGTTGTTTTC 497 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||||||||| || ||||| || |||||||| |||||| || Sbjct 496 CGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCT 437 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | |||||| || | || | || || || |||| | Sbjct 436 TCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATG 377 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 376 TCTTCACGAAAATCTGCAT 358 >seq8 Length=1962940 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || || ||||| |||||| Sbjct 146508 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 146449 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || || | ||||| | Sbjct 146448 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATG 146389 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| || || || || |||||| Sbjct 146388 GTCTTGCCCGTGAGGGTCTTCACGAAA 146362 >seq12 Length=1358207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| || ||||| |||||||||||||| || || || ||||| ||||| || || Sbjct 114309 CAGGCAAGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGT 114250 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||||| ||| | |||||| |||| |||| ||||| || || Sbjct 114249 CAAACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAA 114190 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-C 120817 ||| | |||||| || |||||||| || | ||| | || || || | | |||| | Sbjct 114189 GAAGATGCCCTCTACTGCAGCAAAGGCAACAAGGCGTTGAGCGAAGGTGGACTGCTTGTC 114130 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 || ||||||| || |||||||| ||||| || Sbjct 114129 TG-AGATCCACCGCAATGCCCACTCAGCCTTCTT 114097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417814876560