Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 269 3e-67
seq5 120 3e-22
seq2 109 5e-19
seq461 98.7 1e-15
seq8 98.7 1e-15
seq12 95.1 1e-14
>seq4
Length=2550084
Score = 269 bits (298), Expect = 3e-67
Identities = 1129/1748 (65%), Gaps = 63/1748 (4%)
Strand=Plus/Minus
Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTTATCTTCATC 148118
||||||||||| ||||| ||||| || ||||| | | || | |||| |||
Sbjct 817737 TGGTCAATGAAGGCGCCTCGGTCGGCAGCCATCTGGACGACCTGGCGCTGGGAA---ATC 817681
Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178
||||| | |||||||| || ||| | || |||| ||| | |||| ||| |
Sbjct 817680 TCCCACACGGTCTTGTAGAGAGCCTTAACATCCGCGGGGATGTTGGGGATGTTCTGGATG 817621
Query 148179 GAGCCGCGGTGCGCAAAAAT-CTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237
|||||| | |||| || ||| || ||| | |||| ||||| | || |
Sbjct 817620 GAGCCGTCTTCAGCAATGATTCTGTTTTT-CATAGCATCCGACCATAGGCCCATGTCAAC 817562
Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297
|| || | || || | | || || ||||| ||||||||||| || || || || ||
Sbjct 817561 GAGATCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGACG-AG 817503
Query 148298 A-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356
| || | |||| || | || || || |||||||||| |||| ||||| | ||
Sbjct 817502 AGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTAC 817443
Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416
| || || |||||| || | ||||| |||||| | |||| | | || | | ||
Sbjct 817442 TAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTTGACCT-GC 817384
Query 148417 GCTTCAGAGCCGC--CCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474
|| | |||| || ||||||||||||| || ||| ||||||||||||||||| ||||
Sbjct 817383 TCT-CGGAGCGGCTCCCAGTCCCAGAGCTCGGAAGGTTTCACGTTCCACATGTCGAACTG 817325
Query 148475 CAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534
|| || || || || ||||| | | | | ||| || || | | || ||
Sbjct 817324 AAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGC 817265
Query 148535 CAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593
|| | ||| | ||| | || ||| || || ||||| ||||| |||| |
Sbjct 817264 AAGCT-GCACGGACGCAGTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCA 817206
Query 148594 GC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650
|| | ||| | | | || | ||||| || || | || || || ||||
Sbjct 817205 GCTCACGAGCCTCAG---GGGACTCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAA 817149
Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGA 148710
| ||||| || || || || ||||| ||||| |||||| | ||| || ||| ||
Sbjct 817148 GACCCTGGACACCGACACCGATGGGACGGTGGCGCATGTTGCTGTTGCGAGC-CTCAGGA 817090
Query 148711 GC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATT 148769
| || || |||||| || |||||||||| || ||||| || || || ||||
Sbjct 817089 ACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACAGTCTGGGTAACC 817030
Query 148770 CTGCGCA------GCAATTC---AAAATCGTACTTGTCATCTACG-ATGCATCGGTTCAC 148819
| ||| | || || | |||||| |||| || ||| ||| | || ||
Sbjct 817029 TCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGTAGTCAACGAATGAA--GG--CAG 816974
Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879
||| | ||||| || ||||| ||||| ||||| ||||||||||| || | ||| ||
Sbjct 816973 GGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGGCGCTGTATTCGATGATTTC 816914
Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT-GC 148938
| |||||| ||| || || ||| | |||||| || |||||||||| ||| ||
Sbjct 816913 AGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGC 816854
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACC 148998
| | |||||||| |||||| | || ||||| || ||| | ||| | || | |
Sbjct 816853 ATG-ATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAAT--AGC 816797
Query 148999 GATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTATA 149052
| ||| | | | || ||| || || | |||||||| ||| ||| ||
Sbjct 816796 GTACCAGAGCTTCTGGGC---CTTCATGGTC-TTGCGACCCTTACCGGCCTTCTCATACT 816741
Query 149053 AAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112
||||| ||| ||| ||||||||||||||||| | || || ||||||| | |
Sbjct 816740 TCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGG 816681
Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172
|||||||||| | ||| | |||| | | || |||||||| |||||||| || | ||
Sbjct 816680 GGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCC 816621
Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232
| |||||| | | || || || | ||||| || ||| ||| ||||
Sbjct 816620 ATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGT 816561
Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292
||| | ||| | || |||||||| ||||||| ||| | |||| || || |
Sbjct 816560 CGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTC 816501
Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349
|| ||||| |||||||| |||| || | ||||||| || || |||| ||| ||
Sbjct 816500 GCTTGTTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGG 816441
Query 149350 CAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGT 149409
| ||| ||| || || || ||| | |||| ||| || || | | ||
Sbjct 816440 TGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGT 816381
Query 149410 GCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGT 149467
| ||||||| |||||||| || ||| | ||| ||||| || || ||| ||| ||
Sbjct 816380 GGACGTTGAGACCGATGCCACCAGCCAT-CTTGGAGATCATGGCACACGTC-TTGAGGGT 816323
Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTG 149527
|||||| ||||| |||||||| ||||||| | || ||||| || | | ||
Sbjct 816322 GTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTG 816263
Query 149528 CGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCT 149587
|| | | || || || ||| | ||||||| |||||| |||||| | ||| |
Sbjct 816262 GGGCTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGA 816203
Query 149588 CATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGAC 149647
||| | | ||| | |||||| || || || |||||||| || ||| || | | |||
Sbjct 816202 CATGAGGTTGTAGGTCTCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGAC 816143
Query 149648 GCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCC 149707
||||| | ||| ||||| |||||||| | | ||| | || || || | ||| |
Sbjct 816142 ACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCATCGATCTTAAGGAGGTA--C 816085
Query 149708 GTT--TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATG 149765
| | || || |||||| |||| ||||||| ||||| ||||| ||| | | | | |||
Sbjct 816084 GATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCATAGACGATG 816025
Query 149766 GCGGCGTC 149773
|| | |||
Sbjct 816024 GCAGAGTC 816017
>seq5
Length=2272025
Score = 120 bits (132), Expect = 3e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | |||| ||| ||||| || ||||| |||| || ||| ||||||||||
Sbjct 1174673 AAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGC 1174732
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || || ||||||||||| || |||||||| |||||||| ||||
Sbjct 1174733 TGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC 1174792
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | ||||||| | |||||| || | ||||| || || ||
Sbjct 1174793 TTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 1174852
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || ||||| ||||||||
Sbjct 1174853 GTGAGGGTCTTGACGAAGATCTGCAT 1174878
>seq2
Length=4202288
Score = 109 bits (120), Expect = 5e-19
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| || ||||| || ||||| ||| || ||| ||||||||||||||| ||
Sbjct 1893476 GGTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTTCC 1893535
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| || || ||||| |||||||| |||||| |||
Sbjct 1893536 GGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1893595
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| || ||| || || | |||| ||| ||||| || || ||
Sbjct 1893596 CACATTGTCGATGGTGTCGGAGGACTCAACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 1893655
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 1893656 CTTGACGA 1893663
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| || ||||| || ||||| |||| || ||| ||||||||||||||| ||
Sbjct 1893248 GGTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGCTGCTTACC 1893307
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| || ||||| || |||||||| ||||| |||
Sbjct 1893308 AGCAAAGATAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTAGACTT 1893367
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | | |||||| || | || | ||| || || || | ||
Sbjct 1893368 CACATTGTCGATGGTATCAGATGACTCCACCTCCAGAGTAATGGTCTTTCCAGTTAAGGT 1893427
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 1893428 CTTGACGAAGATTTGCAT 1893445
Score = 87.8 bits (96), Expect = 2e-12
Identities = 126/176 (72%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520
||||||||| ||||| || ||||| ||| | || || || ||||| ||||||||
Sbjct 1893760 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCCTCAAGCTGCTTA 1893817
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| || | || || ||||||||||| || || ||||| |||||||| ||||| |
Sbjct 1893818 CCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGAC 1893877
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | || | ||||||| || ||| || || | |||| ||| ||||| ||
Sbjct 1893878 TTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 1893933
>seq461
Length=561
Score = 98.7 bits (108), Expect = 1e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||| || || ||||| || ||||| ||| | | || ||| || |||
Sbjct 335 AAATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCTAGC 276
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || || ||| | || | | ||| ||||| || || || ||||||||||| ||||
Sbjct 275 TGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATC 216
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||||| | |||||| || | ||||| |||||| |||
Sbjct 215 TTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTTCCG 156
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| ||||| || || |||||||||
Sbjct 155 GTCAAGGTTTTCACAAAGATCTGCATG 129
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || |||||||| ||| || || || || || || || || |
Sbjct 554 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCG--TCTTCAAGTTGTTTTC 497
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || ||||| || |||||||| |||||| ||
Sbjct 496 CGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCT 437
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||||| | |||||| || | || | || || || |||| |
Sbjct 436 TCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATG 377
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 376 TCTTCACGAAAATCTGCAT 358
>seq8
Length=1962940
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||||||||| || || ||||| ||||||
Sbjct 146508 TCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 146449
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || || | ||||| |
Sbjct 146448 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATG 146389
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652
|| ||||| || || || || ||||||
Sbjct 146388 GTCTTGCCCGTGAGGGTCTTCACGAAA 146362
>seq12
Length=1358207
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698
|||||| || ||||| |||||||||||||| || || || ||||| ||||| || ||
Sbjct 114309 CAGGCAAGCGAAGTCGGTGTGCAGGCCCTCATCACGGGAGATCAGTTCGTTTGAGAAGGT 114250
Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758
|| || ||||||| ||| | |||||| |||| |||| ||||| || ||
Sbjct 114249 CAAACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAAGCACCACTGAA 114190
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-C 120817
||| | |||||| || |||||||| || | ||| | || || || | | |||| |
Sbjct 114189 GAAGATGCCCTCTACTGCAGCAAAGGCAACAAGGCGTTGAGCGAAGGTGGACTGCTTGTC 114130
Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851
|| ||||||| || |||||||| ||||| ||
Sbjct 114129 TG-AGATCCACCGCAATGCCCACTCAGCCTTCTT 114097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417814876560
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