Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 1e-12 >seq7 Length=2071471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 279854 CGTTCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGT 279913 ||||| |||||| | || ||||| || || ||| ||||| ||| |||||| | Sbjct 1458545 CGTTCCATTCCTTCAGTCATTGATGGCTTCAAGCCTGGTCAGCGCAAGGTTATATACGCC 1458486 Query 279914 TGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCA 279973 || ||||| || || | || || || | |||| | | || |||||||||||||| Sbjct 1458485 TGCTTCAAGAGGAATCTCGTCAAAGACAAGAAGGTTGTTGAATTGGCAGGTTATGTTTCT 1458426 Query 279974 GAACATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCC 280033 ||| | | | || || |||||||| ||| ||||| | ||||| || || ||| Sbjct 1458425 GAAAACACGGCATACCACCACGGTGAGATGTCCCTTCAGCAGACAATTGTTGGACTGGCC 1458366 Query 280034 CAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCA-CCAAATGGTCAATTTGGTTC 280092 ||| |||| || | ||||||||| | || |||| | | |||| ||| | || ||||| Sbjct 1458365 CAAAATTTCATCGGATCAAACAACATCAA-CTGCCTGGAGCCAAGTGGAAACTTCGGTTC 1458307 Query 280093 TCG 280095 ||| Sbjct 1458306 TCG 1458304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805288216734