Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 1e-12
>seq7
Length=2071471
Score = 89.7 bits (98), Expect = 1e-12
Identities = 167/243 (69%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 279854 CGTTCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGT 279913
||||| |||||| | || ||||| || || ||| ||||| ||| |||||| |
Sbjct 1458545 CGTTCCATTCCTTCAGTCATTGATGGCTTCAAGCCTGGTCAGCGCAAGGTTATATACGCC 1458486
Query 279914 TGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCA 279973
|| ||||| || || | || || || | |||| | | || ||||||||||||||
Sbjct 1458485 TGCTTCAAGAGGAATCTCGTCAAAGACAAGAAGGTTGTTGAATTGGCAGGTTATGTTTCT 1458426
Query 279974 GAACATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCC 280033
||| | | | || || |||||||| ||| ||||| | ||||| || || |||
Sbjct 1458425 GAAAACACGGCATACCACCACGGTGAGATGTCCCTTCAGCAGACAATTGTTGGACTGGCC 1458366
Query 280034 CAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCA-CCAAATGGTCAATTTGGTTC 280092
||| |||| || | ||||||||| | || |||| | | |||| ||| | || |||||
Sbjct 1458365 CAAAATTTCATCGGATCAAACAACATCAA-CTGCCTGGAGCCAAGTGGAAACTTCGGTTC 1458307
Query 280093 TCG 280095
|||
Sbjct 1458306 TCG 1458304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186805288216734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |