Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq461 95.1 8e-15
seq5 93.3 3e-14
>seq461
Length=561
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||||| || || || || || |||||||| ||||
Sbjct 357 ACCACCACGGAGACGGAGGACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 298
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || | |||| || | ||||||||||| || ||||| | ||| || ||| | ||
Sbjct 297 GAGGGTTCTGCCGTCTTCTAGCTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGG 238
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| || || ||| || | ||| | ||||||| ||||
Sbjct 237 AATTCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAGCTCTCCA 179
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| ||||| || || || ||||| ||||||||||||||
Sbjct 178 CCTCCAAGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATCTGCAT 130
Score = 82.4 bits (90), Expect = 5e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||||||| || || ||| ||||| |||||||| |||| |
Sbjct 128 CCACCACGGAGACGGAGGACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCG 69
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || |||| || | ||||||||||| || ||||| | ||||||||| | ||
Sbjct 68 AGGGTACGGCCGTCTTCTAGCTGTTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGG 9
Query 33643 ACACCTTC 33650
| ||||||
Sbjct 8 ATACCTTC 1
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/194 (70%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
||| || || ||||||||||| | | || || |||| || | |||||||||||| ||
Sbjct 549 CTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCGTCTTCAAGTTGTTTTCCGGCGAA 490
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
||||| | |||||| ||| | || | || || ||||| || ||| ||| || |
Sbjct 489 GATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGT 431
Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| | ||||||| ||||| || | || ||||| || ||||| || || || |
Sbjct 430 TGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATGTCTTCA 371
Query 33737 CAAAGATCTGCATA 33750
| || |||||||||
Sbjct 370 CGAAAATCTGCATA 357
>seq5
Length=2272025
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | || || | ||||| || || |||||||| || || |||||||| |||
Sbjct 1174650 CACCACCACGCAGGCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGC 1174709
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
|| ||||| |||| || | || || || ||||| || | |||||||| || | |
Sbjct 1174710 TCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGG 1174769
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || ||||| || || || | ||| ||| | ||||||| || |||
Sbjct 1174770 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATGGTGTCGGAAGACTCC 1174828
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| |||||||| || || || | || || || |||||||||||
Sbjct 1174829 ACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 1174878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702020996480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |