Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 >seq12 Length=1358207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117 ||||| ||||| ||| | |||| ||||| ||| || || || ||||||||| | | Sbjct 114379 ATCGAGAAGGAATTTCTCACTGAAGCGCTTCCCTGTGCTTTACTCGGCATGAACTCCGA- 114437 Query 47118 TCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTC-TGTTGGTGCAGCTCGGACAAC 47175 ||| ||| ||||||||||||| || || ||||||| | ||| ||| ||||| | Sbjct 114438 TCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCTTCTTGTTGC-CCTCGGCAATG 114496 Query 47176 CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235 ||| | || || || || || || |||||| | |||||||| |||| |||| Sbjct 114497 AGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCGGTGGCA 114556 Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273 | ||||| || |||||||| || ||||| || ||| || Sbjct 114557 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 114594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608256925840