Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 1e-14
>seq12
Length=1358207
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117
||||| ||||| ||| | |||| ||||| ||| || || || ||||||||| | |
Sbjct 114379 ATCGAGAAGGAATTTCTCACTGAAGCGCTTCCCTGTGCTTTACTCGGCATGAACTCCGA- 114437
Query 47118 TCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTC-TGTTGGTGCAGCTCGGACAAC 47175
||| ||| ||||||||||||| || || ||||||| | ||| ||| ||||| |
Sbjct 114438 TCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCTTCTTGTTGC-CCTCGGCAATG 114496
Query 47176 CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235
||| | || || || || || || |||||| | |||||||| |||| ||||
Sbjct 114497 AGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGAAAACATTTCTCTCGGTGGCA 114556
Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273
| ||||| || |||||||| || ||||| || ||| ||
Sbjct 114557 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 114594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608256925840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |