Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 5e-20
seq12 111 2e-18
>seq4
Length=2550084
Score = 116 bits (128), Expect = 5e-20
Identities = 330/505 (65%), Gaps = 23/505 (5%)
Strand=Plus/Plus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||||| || ||| |||||||| | | | ||| ||||| |||| ||||||
Sbjct 816002 CACAAGGAGGAGCTAGACTCTGCCATCGTCTATGACCGTGACTTCAACTACCAGTACTTC 816061
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCG----CGATATTGTCGTCGA 259797
|| | ||| || || || ||||| | ||| || | | ||||||| |
Sbjct 816062 GGCTTCAAGACTCTGGAGCGATCGTACCTC-CTTAAGATCGATGGCAAGATTGTCG---A 816117
Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857
||| || ||| | ||| ||||||||||| | | || | |||| | | ||
Sbjct 816118 GCGACCACAGCACATGATCATGCGTGTCTCTGTGGGTA--TCTGGGGT-------GATGA 816168
Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTC 259917
|| | |||| || |||| |||||| | |||||| | |||| || |||
Sbjct 816169 CA------TCGAGCGTGTCCTCGAGACCTACAACCTCATGTCCATGAAGTTTTTTACCCA 816222
Query 259918 AGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCT 259977
|| | ||||| ||||| || || || || || | || ||| || || ||||| |
Sbjct 816223 CGCCTCCCCCACCCTCTTCAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTT 816282
Query 259978 GTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCT 260037
| | |||||||||| || || ||||| ||||| ||||| |||||| ||| || |
Sbjct 816283 GGTTGACATGAAGGAGGACAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCAT 816342
Query 260038 CATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGC 260097
||||||||| ||| || ||||||||| | || ||| | ||||| | || |
Sbjct 816343 GATCTCCAAGATGGCTGGTGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTC 816402
Query 260098 CTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAA 260157
||| | || || ||||| || ||||| || | ||||||||||| || || ||
Sbjct 816403 ATACATTGCCGGTACCAATGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAA 816462
Query 260158 CGACACGGCGCGCTACGTCGACCAG 260182
| |||| || || ||||| ||||||
Sbjct 816463 CAACACTGCTCGGTACGTGGACCAG 816487
>seq12
Length=1358207
Score = 111 bits (122), Expect = 2e-18
Identities = 124/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 1455905 CTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAG 1455964
|||| || ||||| ||||||||||| ||||||||||| || || |||| |
Sbjct 113828 CTTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTGGTCGAGCGATTTAGCGCTG 113887
Query 1455965 AGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCC 1456024
| || || | || ||||| |||| || || || ||||||||| || || |||||||
Sbjct 113888 AAGTTCAGATCCCGGAGGCCCGTTGTTTCTATGGCTTCCAGATCATGATGGAGAACATCC 113947
Query 1456025 ACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
||||||| |||||||| || || |||||||| ||| ||||||| ||
Sbjct 113948 ACTCTGAGACCTACTCTCTGCTCATCGACACATACATCAAGGAGCC 113993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177763552792028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |