Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 143 3e-29
seq5 105 7e-18
seq461 96.9 4e-15
>seq2
Length=4202288
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||||||||| ||||||||||||||||
Sbjct 1893219 CCGCCACGGAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTC 1893278
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| || || ||||| || | ||||||||| || || ||
Sbjct 1893279 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGG 1893338
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || || || ||| | || || || || |||||
Sbjct 1893339 ATACCCTCCTTGTCCTGAATCTTAGACTTCACATTGTCGATGGTATCAGATGACTCCACC 1893398
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||||||||| || || ||||| || || ||||| ||||||||
Sbjct 1893399 TCCAGAGTAATGGTCTTTCCAGTTAAGGTCTTGACGAAGATTTGCAT 1893445
Score = 123 bits (136), Expect = 3e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||||| || ||||| || ||||||||||| ||||||||||||||| | ||| |
Sbjct 1893456 AGTCGCAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGG 1893515
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || || ||||||| ||||||||| || || || ||||| ||
Sbjct 1893516 CCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCC 1893575
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || ||| | |||||||| || || || || |||||
Sbjct 1893576 TTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCAACCTCAAGAGTG 1893635
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGA 134703
||||| || || || | || || ||||
Sbjct 1893636 ATGGTCTTGCCAGTGAGGGTCTTGACGA 1893663
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||| ||||| || ||||||||||||
Sbjct 1893731 CCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1893790
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| || || ||||| || | ||||||||| || || ||
Sbjct 1893791 AGGGTTCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGA 1893850
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||| || || ||
Sbjct 1893851 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1893910
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| ||||| ||||| || || ||
Sbjct 1893911 TCAAGAGTGATGGTCTTGCCCGT 1893933
>seq5
Length=2272025
Score = 105 bits (116), Expect = 7e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||| ||||| || ||||||||||||| | |||| | ||| ||||||||
Sbjct 1174675 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGCTG 1174734
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || ||||| || | |||||||| || || || ||||| || || || || || ||
Sbjct 1174735 CTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 1174794
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | |||||||| || ||||| || || || || || || || ||
Sbjct 1174795 GGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 1174854
Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717
| || || ||||| || ||||| |||
Sbjct 1174855 GAGGGTCTTGACGAAGATCTGCATCTTG 1174882
>seq461
Length=561
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || |||||||| || |||||||||||| | | ||| ||| || ||||||
Sbjct 332 TGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCTAGCTGT 273
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || ||||| | ||| || || || || || ||||| || || || || ||
Sbjct 272 TTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTG 213
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || ||| | |||||||| ||||| || | || |||||||| |||||
Sbjct 212 GCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTTCCGGTC 153
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || || |||||
Sbjct 152 AAGGTTTTCACAAAGATCTGCAT 130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395279164880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |